RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 LGR4Q9BXB1 951 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 TNFRSF12AQ9NP84 129 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 CYP26B1Q9NR63 512 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 MBD1Q9UIS9 605 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-212ENST00000529046 SUGT1Q9Y2Z0 365 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 KIF21BO75037 1637 aa7.05□□□□□ -1.28
CSDE1-212ENST00000529046 NUDT19A8MXV4 375 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 AGRPO00253 132 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 TBC1D8O95759 1140 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 ZSCAN22P10073 491 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-212ENST00000529046 HOXC12P31275 282 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 AMPD2Q01433 879 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 IFRD2Q12894 506 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-212ENST00000529046 C2orf27AQ580R0 203 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 ZC3H12BQ5HYM0 836 aaKnown RBP7.04□□□□□ -1.28
CSDE1-212ENST00000529046 THAP3Q8WTV1 239 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-212ENST00000529046 CCDC140Q96MF4 163 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 TBX22Q9Y458 520 aa7.04□□□□□ -1.28
CSDE1-212ENST00000529046 FHOD3Q2V2M9 1422 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 STXBP3O00186 592 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 VAMP4O75379 141 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 GRIA2P42262 883 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 GFRA1P56159 465 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 MVKQ03426 396 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
CSDE1-212ENST00000529046 HSP90AA2PQ14568 343 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-212ENST00000529046 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 EEF1DP3Q658K8 133 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 LCNL1Q6ZST4 164 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 SIAH1Q8IUQ4 282 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 RNPC3Q96LT9 517 aaKnown RBP7.03□□□□□ -1.28
CSDE1-212ENST00000529046 KLHL14Q9P2G3 628 aa7.03□□□□□ -1.28
CSDE1-212ENST00000529046 CNOT6Q9ULM6 557 aaKnown RBP7.03□□□□□ -1.28
CSDE1-212ENST00000529046 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.28
CSDE1-212ENST00000529046 A0A1W2PQJ5 194 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 RFXAPO00287 272 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 KCNH1O95259 989 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 RAPGEF3O95398 923 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 MSL3P1P0C860 447 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 CORO7P57737 925 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 MAP4K2Q12851 820 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 DPY19L1Q2PZI1 675 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 SLC35F1Q5T1Q4 408 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 GIMAP6Q6P9H5 292 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 TMC6Q7Z403 805 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 KREMEN2Q8NCW0 462 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 NPLOC4Q8TAT6 608 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 KISS1RQ969F8 398 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-212ENST00000529046 OSBP2Q969R2 916 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 AARSD1Q9BTE6 412 aaKnown RBP7.02□□□□□ -1.29
CSDE1-212ENST00000529046 CNTD2Q9H8S5 307 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 BACE2Q9Y5Z0 518 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 MAGI2Q86UL8 1455 aa7.02□□□□□ -1.29
CSDE1-212ENST00000529046 FMN1Q68DA7 1419 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 DENND4BO75064 1496 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-212ENST00000529046 FAM153BP0C7A2 387 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 L1CAMP32004 1257 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 SEPHS1P49903 392 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 ZNF385BQ569K4 471 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-212ENST00000529046 RPTNQ6XPR3 784 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 JAZF1Q86VZ6 243 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 SIGLEC10Q96LC7 697 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 IRF2BPLQ9H1B7 796 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 PDLIM7Q9NR12 457 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 TMEM260Q9NX78 707 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 NPFFR2Q9Y5X5 522 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 PLCH2O75038 1416 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
CSDE1-212ENST00000529046 ADAMTSL3P82987 1691 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 HECW2Q9P2P5 1572 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 FANCAO15360 1455 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 C2orf71A6NGG8 1288 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 ARNTLO00327 626 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 N4BP3O15049 544 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 DLX3O60479 287 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 EPHB3P54753 998 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 SQSTM1Q13501 440 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 SSPNQ14714 243 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 CBX2Q14781 532 aaPredicted RBP7□□□□□ -1.29
CSDE1-212ENST00000529046 NR1I3Q14994 352 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 SF1Q15637 639 aaKnown RBP7□□□□□ -1.29
CSDE1-212ENST00000529046 FOXB2Q5VYV0 432 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 BICRALQ6AI39 1079 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 DENND5AQ6IQ26 1287 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 AMIGO3Q86WK7 504 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 FRS2Q8WU20 508 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 KANSL2Q9H9L4 492 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 LRP2BPQ9P2M1 347 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 IRAK3Q9Y616 596 aa7□□□□□ -1.29
CSDE1-212ENST00000529046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-212ENST00000529046 CFAP74Q9C0B2 1584 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 PTPRMP28827 1452 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 TRAV20A0A0B4J274 112 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 TLDC2A0PJX2 215 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms