RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TYW1BQ6NUM6 668 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 ARMCX2Q7L311 632 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 OTOP1Q7RTM1 612 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 TBCKQ8TEA7 893 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 FAM20AQ96MK3 541 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 AIFM3Q96NN9 605 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 SENP7Q9BQF6 1050 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 SDF4Q9BRK5 362 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 WDR11Q9BZH6 1224 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 SCAND2PQ9GZW5 306 aaPredicted RBP9□□□□□ -0.97
SSBP3-211ENST00000528787 TBC1D22BQ9NU19 505 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 FOXD4L1Q9NU39 408 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 Q9Y3F1 56 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 GOLGA6L22H0YM25 854 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 FOXN1O15353 648 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 NEMFO60524 1076 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 CCNT1O60563 726 aaKnown RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 PPFIA3O75145 1194 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 F13A1P00488 732 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MYCLP12524 364 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 AKR1A1P14550 325 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 ICAM3P32942 547 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 LBX1P52954 281 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 KRT85P78386 507 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 GUCY1B3Q02153 619 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 UBE2SQ16763 222 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 LETM2Q2VYF4 491 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 Q4G0T1 1027 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 TTC38Q5R3I4 469 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 ARL6IP4Q66PJ3 421 aaKnown RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 POTEEQ6S8J3 1075 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 KCTD17Q8N5Z5 321 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 CCDC34Q96HJ3 373 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 TAAR1Q96RJ0 339 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 RIT2Q99578 217 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MXRA8Q9BRK3 442 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 HMX1Q9NP08 348 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 JADE2Q9NQC1 790 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 DDX25Q9UHL0 483 aaKnown RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 FAM184BQ9ULE4 1060 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 PTPN22Q9Y2R2 807 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MORC2Q9Y6X9 1032 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-211ENST00000528787 MYH15Q9Y2K3 1946 aa8.99□□□□□ -0.97
SSBP3-211ENST00000528787 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SLC26A4O43511 780 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 KPNA6O60684 536 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 COBLO75128 1261 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 BRD1O95696 1058 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 PTMSP20962 102 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SFNP31947 248 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 PRPHP41219 470 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 FOSBP53539 338 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 KRT76Q01546 638 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 CNTN2Q02246 1040 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 ACVR2BQ13705 512 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SF3A1Q15459 793 aaKnown RBP8.98□□□□□ -0.97
SSBP3-211ENST00000528787 INF2Q27J81 1249 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 MYSM1Q5VVJ2 828 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 RDM1Q8NG50 284 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 ERMNQ8TAM6 284 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 KCNG4Q8TDN1 519 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 TNFRSF25Q93038 417 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 FERMT2Q96AC1 680 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 INPP4AQ96PE3 977 aaPredicted RBP8.98□□□□□ -0.97
SSBP3-211ENST00000528787 GBP4Q96PP9 640 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 PYM1Q9BRP8 204 aaKnown RBP8.98□□□□□ -0.97
SSBP3-211ENST00000528787 SEZ6LQ9BYH1 1024 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 AP5M1Q9H0R1 490 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 R3HDMLQ9H3Y0 253 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 NFASCO94856 1347 aa8.98□□□□□ -0.97
SSBP3-211ENST00000528787 MCM3APO60318 1980 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 RBM47A0AV96 593 aaKnown RBP8.97□□□□□ -0.97
SSBP3-211ENST00000528787 MEIS1O00470 390 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
SSBP3-211ENST00000528787 SEPT4O43236 478 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 YEATS4O95619 227 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 GH1P01241 217 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 RARBP10826 455 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
SSBP3-211ENST00000528787 TXLNAP40222 546 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 CPT1AP50416 773 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 NR5A1Q13285 461 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 NPY5RQ15761 445 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 CALCRLQ16602 461 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 PRR16Q569H4 304 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 HAUS3Q68CZ6 603 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 PLA2G4DQ86XP0 818 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 NEK9Q8TD19 979 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 CRYGNQ8WXF5 182 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 TBC1D5Q92609 795 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 AK8Q96MA6 479 aa8.97□□□□□ -0.97
SSBP3-211ENST00000528787 ZNF577Q9BSK1 485 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms