RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.233e-8■■■■■ 34.2
CAPN1-216ENST00000528739 CDK7P50613 346 aa16.46■□□□□ 0.23
CAPN1-216ENST00000528739 DHX37Q8IY37 1157 aaKnown RBP16.46■□□□□ 0.23
CAPN1-216ENST00000528739 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
CAPN1-216ENST00000528739 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.23
CAPN1-216ENST00000528739 PPP1R12CQ9BZL4 782 aa16.46■□□□□ 0.23
CAPN1-216ENST00000528739 RTEL1Q9NZ71 1219 aa16.46■□□□□ 0.23
CAPN1-216ENST00000528739 KIAA0355O15063 1070 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 KPNA6O60684 536 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 SLC34A2O95436 690 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 PURAQ00577 322 aaKnown RBP16.45■□□□□ 0.22
CAPN1-216ENST00000528739 GHRHRQ02643 423 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 VSIG10LQ86VR7 867 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 IL31RAQ8NI17 732 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 KCNB2Q92953 911 aa16.45■□□□□ 0.22
CAPN1-216ENST00000528739 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
CAPN1-216ENST00000528739 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-216ENST00000528739 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 NAPAP54920 295 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 FPGSQ05932 587 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 LAMC2Q13753 1193 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 GNPTABQ3T906 1256 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 CCDC62Q6P9F0 684 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 PPP1R13LQ8WUF5 828 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 TRPV6Q9H1D0 765 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 LCTP09848 1927 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 MYH6P13533 1939 aa16.44■□□□□ 0.22
CAPN1-216ENST00000528739 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
CAPN1-216ENST00000528739 A6NJR5 290 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 TIMP1P01033 207 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 ITGB8P26012 769 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
CAPN1-216ENST00000528739 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
CAPN1-216ENST00000528739 UBE2SQ16763 222 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 CYP46A1Q9Y6A2 500 aa16.43■□□□□ 0.22
CAPN1-216ENST00000528739 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-216ENST00000528739 B4GALT4O60513 344 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 GGPS1O95749 300 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 MMP3P08254 477 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 CDC27P30260 824 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 SHHQ15465 462 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 DGKDQ16760 1214 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 NBPF20Q3BBV1 942 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 TMEM199Q8N511 208 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 SPATA33Q96N06 139 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 HIPK3Q9H422 1215 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 EHMT1Q9H9B1 1298 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 CNTNAP5Q8WYK1 1306 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 LRRC37A2A6NM11 1700 aa16.42■□□□□ 0.22
CAPN1-216ENST00000528739 MEIS2O14770 477 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 EPB41L2O43491 1005 aaKnown RBP16.41■□□□□ 0.22
CAPN1-216ENST00000528739 SUPT20HL2P0C7V6 817 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 CYP2C18P33260 490 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
CAPN1-216ENST00000528739 C9orf50Q5SZB4 431 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 MFSD5Q6N075 450 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 NLRX1Q86UT6 975 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 SLC43A3Q8NBI5 491 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 ALDH8A1Q9H2A2 487 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-216ENST00000528739 TRMT13Q9NUP7 481 aaKnown RBP16.41■□□□□ 0.22
CAPN1-216ENST00000528739 TBX21Q9UL17 535 aa16.41■□□□□ 0.22
CAPN1-216ENST00000528739 SMCO2A6NFE2 343 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 PIK3CDO00329 1044 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 NOP56O00567 594 aaKnown RBP16.4■□□□□ 0.22
CAPN1-216ENST00000528739 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 STAM2O75886 525 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 RGS20O76081 388 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 CD4P01730 458 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 TGFB3P10600 412 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 ADCY7P51828 1080 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 CCL23P55773 120 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 SP4Q02446 784 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 PPIGQ13427 754 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■■■□□ 16.9
CAPN1-216ENST00000528739 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
CAPN1-216ENST00000528739 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
CAPN1-216ENST00000528739 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
CAPN1-216ENST00000528739 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
CAPN1-216ENST00000528739 PCDHA6Q9UN73 950 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
CAPN1-216ENST00000528739 FIBPO43427 364 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 CYP2C9P11712 490 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 CSF2RAP15509 400 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
CAPN1-216ENST00000528739 RCAN1P53805 252 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms