RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 PLEKHN1Q494U1 663 aaPredicted RBP8.49□□□□□ -1.05
PCF11-202ENST00000528336 MROH9Q5TGP6 573 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 Q8N1Y9 231 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 FBXO15Q8NCQ5 510 aaPredicted RBP8.49□□□□□ -1.05
PCF11-202ENST00000528336 SGPP1Q9BX95 441 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 MCOLN1Q9GZU1 580 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 BCAS3Q9H6U6 928 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 SIRT5Q9NXA8 310 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 NUDT5Q9UKK9 219 aa8.49□□□□□ -1.05
PCF11-202ENST00000528336 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 PLD2O14939 933 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 CDC45O75419 566 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 FARP2O94887 1054 aaPredicted RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 CRTAMO95727 393 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 SOD2P04179 222 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 GRK2P25098 689 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 GRK3P35626 688 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 MAPKAPK2P49137 400 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 OLFML2BQ68BL8 750 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 OGFOD2Q6N063 350 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 ZC3H14Q6PJT7 736 aaKnown RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 NETO2Q8NC67 525 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 KCNN1Q92952 543 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 PEX11GQ96HA9 241 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 MAGEB10Q96LZ2 347 aaPredicted RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 MRPL4Q9BYD3 311 aaKnown RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 IPPKQ9H8X2 491 aa8.48□□□□□ -1.05
PCF11-202ENST00000528336 TMA7Q9Y2S6 64 aaKnown RBP8.48□□□□□ -1.05
PCF11-202ENST00000528336 EFCAB14O75071 495 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 DGKIO75912 1065 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 SRGAP2CP0DJJ0 459 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 COL6A2P12110 1019 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 ZNF648Q5T619 568 aaPredicted RBP8.47□□□□□ -1.05
PCF11-202ENST00000528336 C16orf86Q6ZW13 317 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
PCF11-202ENST00000528336 BRAPQ7Z569 592 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 RIOX2Q8IUF8 465 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 AP5M1Q9H0R1 490 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 EPB41L1Q9H4G0 881 aa8.47□□□□□ -1.05
PCF11-202ENST00000528336 FAM47E-STBD1D6RA91 191 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 PEX10O60683 326 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 RASGRP1O95267 797 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 ZNF200P98182 395 aaPredicted RBP8.46□□□□□ -1.06
PCF11-202ENST00000528336 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 PAK1Q13153 545 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 TCEA2Q15560 299 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 TKFCQ3LXA3 575 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 DCP2Q8IU60 420 aaKnown RBP8.46□□□□□ -1.06
PCF11-202ENST00000528336 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 GSTCDQ8NEC7 633 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 SCLYQ96I15 445 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 FAM84AQ96KN4 292 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
PCF11-202ENST00000528336 HRKO00198 91 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 SGSM2O43147 1006 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
PCF11-202ENST00000528336 APPP05067 770 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 TRIM61Q5EBN2 209 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 MILR1Q7Z6M3 343 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 ZC3H7AQ8IWR0 971 aaKnown RBP8.45□□□□□ -1.06
PCF11-202ENST00000528336 PCDH19Q8TAB3 1148 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCF11-202ENST00000528336 SEC14L1Q92503 715 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 CNTD2Q9H8S5 307 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
PCF11-202ENST00000528336 TEX51A0A1B0GUA7 166 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 GNAT1P11488 350 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 NAT1P18440 290 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 FNDC3BQ53EP0 1204 aaKnown RBP8.44□□□□□ -1.06
PCF11-202ENST00000528336 STEAP3Q658P3 488 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 PIP4K2CQ8TBX8 421 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 ALG3Q92685 438 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 FMNL2Q96PY5 1086 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 TRIM39Q9HCM9 518 aa8.44□□□□□ -1.06
PCF11-202ENST00000528336 MBD1Q9UIS9 605 aaPredicted RBP8.44□□□□□ -1.06
PCF11-202ENST00000528336 ARVCFO00192 962 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 HGSO14964 777 aaPredicted RBP8.43□□□□□ -1.06
PCF11-202ENST00000528336 ZBTB7AO95365 584 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 TMEM253P0C7T8 217 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 SLC6A11P48066 632 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 DNM2P50570 870 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 DLG4P78352 724 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 PABPC4Q13310 644 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCF11-202ENST00000528336 SLC9A5Q14940 896 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 SDE2Q6IQ49 451 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 LDHDQ86WU2 507 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 SYNPOQ8N3V7 929 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 FBXW5Q969U6 566 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 SLC38A3Q99624 504 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 CATSPERZQ9NTU4 200 aa8.43□□□□□ -1.06
PCF11-202ENST00000528336 ETV2O00321 342 aaPredicted RBP8.42□□□□□ -1.06
PCF11-202ENST00000528336 KRIT1O00522 736 aa8.42□□□□□ -1.06
PCF11-202ENST00000528336 KCNQ2O43526 872 aa8.42□□□□□ -1.06
PCF11-202ENST00000528336 PYGMP11217 842 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms