RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 USP14P54578 494 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SPA17Q15506 151 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 TDRD12Q587J7 1177 aaKnown RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SAMD1Q6SPF0 538 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ADGRF4Q8IZF3 695 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SECISBP2LQ93073 1101 aaKnown RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 MS4A14Q96JA4 679 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 UTRNP46939 3433 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 TRAF5O00463 557 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 PRPHP41219 470 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 TTC19Q6DKK2 380 aaPredicted RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 MTMR4Q9NYA4 1195 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 PCDHA13Q9Y5I0 950 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 MYH10P35580 1976 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 MEIS1O00470 390 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 KIF11P52732 1056 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 AMPD3Q01432 767 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 MEA1Q16626 185 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 CACNA2D4Q7Z3S7 1137 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 MTMR9Q96QG7 549 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 JMJD4Q9H9V9 463 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 CALCOCO1Q9P1Z2 691 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 TRIM66O15016 1216 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 NFIAQ12857 509 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 GPS2Q13227 327 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 DNAJC21Q5F1R6 531 aaKnown RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 GALNT17Q6IS24 598 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 CERS5Q8N5B7 392 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 AK8Q96MA6 479 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 LRRC1Q9BTT6 524 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 FAM204AQ9H8W3 233 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
C11orf54-207ENST00000528288 KIAA1024Q9UPX6 916 aa8.28□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC88AQ3V6T2 1871 aa8.27□□□□□ -1.08
C11orf54-207ENST00000528288 COL22A1Q8NFW1 1626 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 LAMB1P07942 1786 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 POTEB2H3BUK9 544 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 LAD1O00515 517 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 SLC1A4P43007 532 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 KRT79Q5XKE5 535 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 RAD54LQ92698 747 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 ZNF287Q9HBT7 754 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 USP40Q9NVE5 1235 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 MYO1AQ9UBC5 1043 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 DDX25Q9UHL0 483 aaKnown RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 USP21Q9UK80 565 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 SIK3Q9Y2K2 1263 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 POTECB2RU33 542 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 EIF3CLB5ME19 914 aaKnown RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 VAV2P52735 878 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 TMEM266Q2M3C6 531 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 CCDC40Q4G0X9 1142 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 CENPPQ6IPU0 288 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 TXLNBQ8N3L3 684 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 HAS1Q92839 578 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 EIF3CQ99613 913 aaKnown RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 LZTS2Q9BRK4 669 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 GOLPH3Q9H4A6 298 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 WNK3Q9BYP7 1800 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 ROBO3Q96MS0 1386 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 RNF40O75150 1001 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 GGCXP38435 758 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 MAGEA1P43355 309 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 PAPD7Q5XG87 772 aaKnown RBP8.27□□□□□ -1.09
C11orf54-207ENST00000528288 UNC13DQ70J99 1090 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 IKZF4Q9H2S9 585 aa8.27□□□□□ -1.09
C11orf54-207ENST00000528288 ESYT3A0FGR9 886 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 ZSCAN5CA6NGD5 496 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 EIF3JO75822 258 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 FTCDO95954 541 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 POLR2FP61218 127 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 KCNMA1Q12791 1236 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 COASYQ13057 564 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 USH1GQ495M9 461 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 NOC3LQ8WTT2 800 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 MTMR8Q96EF0 704 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 EHD4Q9H223 541 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 RIOX1Q9H6W3 641 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 PANK4Q9NVE7 773 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 COL5A3P25940 1745 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 SYF2O95926 243 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 ACTN1P12814 892 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 GYS1P13807 737 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 SND1Q7KZF4 910 aaKnown RBP eCLIP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 NUP58Q9BVL2 599 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 LSM14BQ9BX40 385 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 PACSIN1Q9BY11 444 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms