RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 KCNH6Q9H252 994 aa14.47□□□□□ -0.09
SRPRA-202ENST00000527817 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
SRPRA-202ENST00000527817 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.09
SRPRA-202ENST00000527817 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 PDHBP11177 359 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 IL9P15248 144 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 SSTR3P32745 418 aaPredicted RBP14.46□□□□□ -0.09
SRPRA-202ENST00000527817 PTK7Q13308 1070 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 DGKDQ16760 1214 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 LY6KQ17RY6 165 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 PI4K2BQ8TCG2 481 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 HDAC6Q9UBN7 1215 aa14.46□□□□□ -0.09
SRPRA-202ENST00000527817 SNHG28P0DPA3 235 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 MRE11P49959 708 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 ZNF543Q08ER8 600 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 TRIM71Q2Q1W2 868 aaKnown RBP14.45□□□□□ -0.1
SRPRA-202ENST00000527817 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 C7orf31Q8N865 590 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 NSUN6Q8TEA1 469 aaKnown RBP14.45□□□□□ -0.1
SRPRA-202ENST00000527817 EMID1Q96A84 441 aaPredicted RBP14.45□□□□□ -0.1
SRPRA-202ENST00000527817 MRPL38Q96DV4 380 aaKnown RBP14.45□□□□□ -0.1
SRPRA-202ENST00000527817 IWS1Q96ST2 819 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 WDFY4Q6ZS81 3184 aa14.45□□□□□ -0.1
SRPRA-202ENST00000527817 COL4A4P53420 1690 aaPredicted RBP14.45□□□□□ -0.1
SRPRA-202ENST00000527817 HAS3O00219 553 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 PSEN2P49810 448 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 HTRA4P83105 476 aaPredicted RBP14.44□□□□□ -0.1
SRPRA-202ENST00000527817 STXBP2Q15833 593 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 PTPROQ16827 1216 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 CSPP1Q1MSJ5 1256 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 ZNF618Q5T7W0 954 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 VPS53Q5VIR6 699 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 FAM117BQ6P1L5 589 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
SRPRA-202ENST00000527817 SAMD11Q96NU1 681 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 UIMC1Q96RL1 719 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
SRPRA-202ENST00000527817 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
SRPRA-202ENST00000527817 SIP14410 1827 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 TRIOO75962 3097 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 DCXO43602 365 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 LGR5O75473 907 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 FGAP02671 866 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
SRPRA-202ENST00000527817 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 MBTPS1Q14703 1052 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 GPATCH4Q5T3I0 446 aaKnown RBP14.43□□□□□ -0.1
SRPRA-202ENST00000527817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■□□ 15.9
SRPRA-202ENST00000527817 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 SYTL5Q8TDW5 730 aaPredicted RBP14.43□□□□□ -0.1
SRPRA-202ENST00000527817 TBC1D5Q92609 795 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 TOMM22Q9NS69 142 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 PRKAG3Q9UGI9 489 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 FAM50BQ9Y247 325 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 MYO7AQ13402 2215 aa14.43□□□□□ -0.1
SRPRA-202ENST00000527817 EMSYQ7Z589 1322 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 H3BNC9 293 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 PPFIA4O75335 1185 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 AMHP03971 560 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 NHLH1Q02575 133 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 MFSD10Q14728 455 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 COL19A1Q14993 1142 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 USH1GQ495M9 461 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 EPC2Q52LR7 807 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 RRP12Q5JTH9 1297 aaKnown RBP14.42□□□□□ -0.1
SRPRA-202ENST00000527817 C20orf194Q5TEA3 1177 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 DBF4BQ8NFT6 615 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 PABPC5Q96DU9 382 aaKnown RBP14.42□□□□□ -0.1
SRPRA-202ENST00000527817 HELLSQ9NRZ9 838 aa14.42□□□□□ -0.1
SRPRA-202ENST00000527817 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
SRPRA-202ENST00000527817 F2P00734 622 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 HOXD8P13378 290 aaPredicted RBP14.41□□□□□ -0.1
SRPRA-202ENST00000527817 TIGD5Q53EQ6 642 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 PLEKHG4Q58EX7 1191 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 BANK1Q8NDB2 785 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 WNT8BQ93098 351 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 RMDN3Q96TC7 470 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 ABCB11O95342 1321 aa14.41□□□□□ -0.1
SRPRA-202ENST00000527817 RSPH10B2B2RC85 870 aa14.4□□□□□ -0.1
SRPRA-202ENST00000527817 H3BQ06 376 aaPredicted RBP14.4□□□□□ -0.1
SRPRA-202ENST00000527817 NCK2O43639 380 aa14.4□□□□□ -0.1
SRPRA-202ENST00000527817 RSPH10BP0C881 870 aa14.4□□□□□ -0.1
SRPRA-202ENST00000527817 PCP11498 1178 aaKnown RBP14.4□□□□□ -0.1
SRPRA-202ENST00000527817 ZNF200P98182 395 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms