RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CCDC62Q6P9F0 684 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 AFG1LQ8WV93 481 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 MAP3K14Q99558 947 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 SEC63Q9UGP8 760 aaKnown RBP22.3■■□□□ 1.16
CAPN1-211ENST00000527739 SLC12A7Q9Y666 1083 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 MRVI1Q9Y6F6 885 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 SPTBN5Q9NRC6 3674 aaKnown RBP22.29■■□□□ 1.16
CAPN1-211ENST00000527739 ACRP10323 421 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 GNAQP50148 359 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 CCL23P55773 120 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 NBPF20Q3BBV1 942 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 SAMD3Q8N6K7 520 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 ZFP91Q96JP5 570 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-211ENST00000527739 LZTS2Q9BRK4 669 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 PDCD2LQ9BRP1 358 aa22.29■■□□□ 1.16
CAPN1-211ENST00000527739 ALDH8A1Q9H2A2 487 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-211ENST00000527739 LRRC37A2A6NM11 1700 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 SORBS3O60504 671 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 PLEKHA8P1O95397 391 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 NEFLP07196 543 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 CALM1P0DP23 149 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 CALM2P0DP24 149 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 CALM3P0DP25 149 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 SYNE3Q6ZMZ3 975 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 CMTR1Q8N1G2 835 aaKnown RBP22.28■■□□□ 1.16
CAPN1-211ENST00000527739 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 NEK1Q96PY6 1258 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.28■■□□□ 1.16
CAPN1-211ENST00000527739 TRMT13Q9NUP7 481 aaKnown RBP22.28■■□□□ 1.16
CAPN1-211ENST00000527739 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
CAPN1-211ENST00000527739 PRUNE2Q8WUY3 3088 aa22.28■■□□□ 1.16
CAPN1-211ENST00000527739 SUPT20HL2P0C7V6 817 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 LIFRP42702 1097 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 GHRHRQ02643 423 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 PGM5Q15124 567 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 DHX37Q8IY37 1157 aaKnown RBP22.27■■□□□ 1.16
CAPN1-211ENST00000527739 SRBD1Q8N5C6 995 aaKnown RBP22.27■■□□□ 1.16
CAPN1-211ENST00000527739 SPZ1Q9BXG8 430 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 UMODL1Q5DID0 1318 aa22.27■■□□□ 1.16
CAPN1-211ENST00000527739 CYP2C9P11712 490 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 CASTP20810 708 aaKnown RBP22.26■■□□□ 1.15
CAPN1-211ENST00000527739 CCND2P30279 289 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 ARHGAP1Q07960 439 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 ZNF365Q70YC5 407 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 VSIG10LQ86VR7 867 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 CUL5Q93034 780 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 NOC4LQ9BVI4 516 aaKnown RBP22.26■■□□□ 1.15
CAPN1-211ENST00000527739 NOD1Q9Y239 953 aa22.26■■□□□ 1.15
CAPN1-211ENST00000527739 MMP3P08254 477 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 FOSL2P15408 326 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 TMEM240Q5SV17 173 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 C16orf59Q7L2K0 433 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 MICU3Q86XE3 530 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 IL31RAQ8NI17 732 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 SMARCC2Q8TAQ2 1214 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 TCEANC2Q96MN5 208 aa22.25■■□□□ 1.15
CAPN1-211ENST00000527739 hCG_1642624A0A1W2PR95 340 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 SMARCA1P28370 1054 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 LAMC2Q13753 1193 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 GRIN2CQ14957 1233 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 DGKDQ16760 1214 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 RASEFQ8IZ41 740 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 FANCBQ8NB91 859 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 IL23AQ9NPF7 189 aa22.24■■□□□ 1.15
CAPN1-211ENST00000527739 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-211ENST00000527739 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-211ENST00000527739 RGS20O76081 388 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 FGBP02675 491 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 DNAJB2P25686 324 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 FGD1P98174 961 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 KRT32Q14532 448 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 NFRKBQ6P4R8 1299 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 PSRC1Q6PGN9 363 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-211ENST00000527739 KCNV1Q6PIU1 500 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 USP17L6PQ6QN14 398 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 DHX32Q7L7V1 743 aaKnown RBP22.23■■□□□ 1.15
CAPN1-211ENST00000527739 SCLYQ96I15 445 aa22.23■■□□□ 1.15
CAPN1-211ENST00000527739 NAP1L2Q9ULW6 460 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-211ENST00000527739 ADCK5Q3MIX3 580 aa22.22■■□□□ 1.15
CAPN1-211ENST00000527739 SPATA33Q96N06 139 aa22.22■■□□□ 1.15
CAPN1-211ENST00000527739 ALG1Q9BT22 464 aa22.22■■□□□ 1.15
CAPN1-211ENST00000527739 RTEL1Q9NZ71 1219 aa22.22■■□□□ 1.15
CAPN1-211ENST00000527739 BAZ2BQ9UIF8 2168 aaKnown RBP22.21■■□□□ 1.15
CAPN1-211ENST00000527739 TMEM265A0A087WTH1 108 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 GRXCR1A8MXD5 290 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 GGPS1O95749 300 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 PTPN11Q06124 597 aaPredicted RBP22.21■■□□□ 1.15
CAPN1-211ENST00000527739 RPUSD2Q8IZ73 545 aaKnown RBP22.21■■□□□ 1.15
CAPN1-211ENST00000527739 RETREG2Q8NC44 543 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 WNT8AQ9H1J5 351 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 PSTPIP2Q9H939 334 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
CAPN1-211ENST00000527739 PBX2P40425 430 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 EXOSC10Q01780 885 aaKnown RBP22.2■■□□□ 1.14
CAPN1-211ENST00000527739 PTGISQ16647 500 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 GNPTABQ3T906 1256 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 CELF3Q5SZQ8 465 aaKnown RBP22.2■■□□□ 1.14
CAPN1-211ENST00000527739 TMTC3Q6ZXV5 915 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 SGMS1Q86VZ5 419 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms