RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 GHRHRQ02643 423 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 APOBRQ0VD83 1088 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 TTLL4Q14679 1199 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 PGM5Q15124 567 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 BRF1Q92994 677 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 ZEB2O60315 1214 aa12.83□□□□□ -0.35
SNRNP35-203ENST00000526639 CLTBP09497 229 aa12.83□□□□□ -0.35
SNRNP35-203ENST00000526639 PPP1R13LQ8WUF5 828 aa12.83□□□□□ -0.35
SNRNP35-203ENST00000526639 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.35
SNRNP35-203ENST00000526639 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.35
SNRNP35-203ENST00000526639 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 SORBS3O60504 671 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 RGS20O76081 388 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 CDC27P30260 824 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 BMP8BP34820 402 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 CDK7P50613 346 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 RTN1Q16799 776 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 BADQ92934 168 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
SNRNP35-203ENST00000526639 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 ARVCFO00192 962 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 MEIS2O14770 477 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 MYL3P08590 195 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 CPT1AP50416 773 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 ITGA7Q13683 1181 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 HEATR3Q7Z4Q2 680 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 VSIG10LQ86VR7 867 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
SNRNP35-203ENST00000526639 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 RAG1P15918 1043 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 PSMA5P28066 241 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 ANP32AP39687 249 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 PURAQ00577 322 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 PKNOX2Q96KN3 472 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 TOX2Q96NM4 488 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 A6NJR5 290 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 FUT2Q10981 343 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 RUFY3Q7L099 469 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 TDHQ8IZJ6 230 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 CUL5Q93034 780 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 KIAA1217Q5T5P2 1943 aa12.81□□□□□ -0.36
SNRNP35-203ENST00000526639 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 CABYRO75952 493 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 CCND2P30279 289 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 ARHGAP1Q07960 439 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 UBE2SQ16763 222 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 A0A1W2PPC1 479 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 GH1P01241 217 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 SP2Q02086 613 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 BRDTQ58F21 947 aaPredicted RBP12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 SLC43A3Q8NBI5 491 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 PPP1R12CQ9BZL4 782 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 TRPV6Q9H1D0 765 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 BCAS3Q9H6U6 928 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
SNRNP35-203ENST00000526639 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
SNRNP35-203ENST00000526639 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
SNRNP35-203ENST00000526639 KIAA0355O15063 1070 aa12.79□□□□□ -0.36
SNRNP35-203ENST00000526639 B4GALT4O60513 344 aa12.79□□□□□ -0.36
SNRNP35-203ENST00000526639 MMP3P08254 477 aa12.79□□□□□ -0.36
SNRNP35-203ENST00000526639 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms