RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ARIH2O95376 493 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 CCND2P30279 289 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 UBE2SQ16763 222 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 PPP1R18Q6NYC8 613 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 COPS5Q92905 334 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 ZFP91Q96JP5 570 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 RIC8AQ9NPQ8 531 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 A0A1W2PQ45 241 aaPredicted RBP18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 A0A1W2PQY0 241 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 MOXD2PA6NHM9 499 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 PFKFB2O60825 505 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 ASGR1P07306 291 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 SSRP1Q08945 709 aaKnown RBP18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 CPLX2Q6PUV4 134 aaKnown RBP18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 OR6J1Q8NGC5 347 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 FRMPD4Q14CM0 1322 aa18.63■□□□□ 0.57
SSSCA1-202ENST00000526433 H0YGN5 161 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 RGS20O76081 388 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 ADCY7P51828 1080 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 MRPS9P82933 396 aaKnown RBP18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 SCRN1Q12765 414 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 VTI1AQ96AJ9 217 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 KIF2CQ99661 725 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 PCDHA6Q9UN73 950 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 PCDHA8Q9Y5H6 950 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 MYH7BA7E2Y1 1941 aa18.62■□□□□ 0.57
SSSCA1-202ENST00000526433 SPDYE3A6NKU9 549 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 ZEB2O60315 1214 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 RTP1P59025 263 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 PRPF38BQ5VTL8 546 aaKnown RBP18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 TEX2Q8IWB9 1127 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 GLT1D1Q96MS3 346 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 GLT8D2Q9H1C3 349 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 RTEL1Q9NZ71 1219 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
SSSCA1-202ENST00000526433 STAM2O75886 525 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 FOSP01100 380 aaPredicted RBP18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 GH1P01241 217 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 ME3Q16798 604 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 PCNX4Q63HM2 1172 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 XRRA1Q6P2D8 792 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 KCNV1Q6PIU1 500 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 CCDC12Q8WUD4 166 aaPredicted RBP18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 C6orf50Q9HD87 102 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 STARD7Q9NQZ5 370 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 ATP11BQ9Y2G3 1177 aa18.6■□□□□ 0.57
SSSCA1-202ENST00000526433 ELP1O95163 1332 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 ESYT2A0FGR8 921 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 TGFB3P10600 412 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 CPT1AP50416 773 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 SNX17Q15036 470 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 C1orf53Q5VUE5 145 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 NECAB1Q8N987 351 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 UPF2Q9HAU5 1272 aaKnown RBP18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 TMEM260Q9NX78 707 aa18.59■□□□□ 0.57
SSSCA1-202ENST00000526433 A6NJR5 290 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 CABYRO75952 493 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 CDKL5O76039 1030 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 DEXIO95424 95 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 LARGE1O95461 756 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 CLK2P49760 499 aaKnown RBP18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 SP2Q02086 613 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 GNPTABQ3T906 1256 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 TRIM60Q495X7 471 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 AFG1LQ8WV93 481 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 PGBD1Q96JS3 809 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 SH3GLB2Q9NR46 395 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 POLR3EQ9NVU0 708 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 VPS54Q9P1Q0 977 aa18.58■□□□□ 0.56
SSSCA1-202ENST00000526433 SPATA31C2B4DYI2 1134 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 ADAMTS3O15072 1205 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 DTNBO60941 627 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 MYL3P08590 195 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 GNA11P29992 359 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 ICAM3P32942 547 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 TLE2Q04725 743 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 JAKMIP3Q5VZ66 844 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 NLRX1Q86UT6 975 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 CCDC148Q8NFR7 591 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 ZMYND8Q9ULU4 1186 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-202ENST00000526433 KPNA6O60684 536 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 CTDNEP1O95476 244 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms