RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 USP17L6PQ6QN14 398 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 SAMD3Q8N6K7 520 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 AFG1LQ8WV93 481 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.08
USH1C-203ENST00000526181 PPP1R12CQ9BZL4 782 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 POLR3EQ9NVU0 708 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
USH1C-203ENST00000526181 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.08
USH1C-203ENST00000526181 UMODL1Q5DID0 1318 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 KLF18A0A0U1RQI7 1052 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 GH1P01241 217 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 MMP3P08254 477 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 FPGSQ05932 587 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 SYNE3Q6ZMZ3 975 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 VSIG10LQ86VR7 867 aa15.51■□□□□ 0.07
USH1C-203ENST00000526181 GPKOWQ92917 476 aaPredicted RBP eCLIP15.51■□□□□ 0.07
USH1C-203ENST00000526181 MTG1Q9BT17 334 aaPredicted RBP15.51■□□□□ 0.07
USH1C-203ENST00000526181 FRMPD4Q14CM0 1322 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 CNTNAP5Q8WYK1 1306 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 MEIS2O14770 477 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 ZBTB43O43298 467 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 CCND2P30279 289 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 CYP2C18P33260 490 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 NBPF20Q3BBV1 942 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 SMARCC2Q8TAQ2 1214 aa15.5■□□□□ 0.07
USH1C-203ENST00000526181 ALDH8A1Q9H2A2 487 aaPredicted RBP15.5■□□□□ 0.07
USH1C-203ENST00000526181 TRMT13Q9NUP7 481 aaKnown RBP15.5■□□□□ 0.07
USH1C-203ENST00000526181 TRIOBPQ9H2D6 2365 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 GOLGA8AA7E2F4 631 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 GOLGA8BA8MQT2 603 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 REC8O95072 547 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
USH1C-203ENST00000526181 CSF2RAP15509 400 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 CDC27P30260 824 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
USH1C-203ENST00000526181 SP2Q02086 613 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 APOBRQ0VD83 1088 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 FUT2Q10981 343 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 UBE2SQ16763 222 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 RTN1Q16799 776 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 BRDTQ58F21 947 aaPredicted RBP15.49■□□□□ 0.07
USH1C-203ENST00000526181 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 MFSD5Q6N075 450 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 Q6ZUG5 572 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 Q7L0L9 218 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 HEATR3Q7Z4Q2 680 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 HIPK3Q9H422 1215 aa15.49■□□□□ 0.07
USH1C-203ENST00000526181 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
USH1C-203ENST00000526181 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
USH1C-203ENST00000526181 PIK3CDO00329 1044 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 UBA1P22314 1058 aaKnown RBP15.48■□□□□ 0.07
USH1C-203ENST00000526181 FGD1P98174 961 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 WWC2Q6AWC2 1192 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 BLOC1S2Q6QNY1 142 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 C16orf59Q7L2K0 433 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 DHX37Q8IY37 1157 aaKnown RBP15.48■□□□□ 0.07
USH1C-203ENST00000526181 KAT2BQ92831 832 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 BRF1Q92994 677 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 CUL5Q93034 780 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
USH1C-203ENST00000526181 BCAS3Q9H6U6 928 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 RBM28Q9NW13 759 aaKnown RBP15.48■□□□□ 0.07
USH1C-203ENST00000526181 RTEL1Q9NZ71 1219 aa15.48■□□□□ 0.07
USH1C-203ENST00000526181 KIAA1217Q5T5P2 1943 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 KPNA6O60684 536 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 GGPS1O95749 300 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 ZNF286BP0CG31 522 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 ACRP10323 421 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 CYP2C9P11712 490 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 CCL23P55773 120 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 TYW1BQ6NUM6 668 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 TMEM199Q8N511 208 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
USH1C-203ENST00000526181 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
USH1C-203ENST00000526181 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.47■□□□□ 0.07
USH1C-203ENST00000526181 SEZ6LQ9BYH1 1024 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 WNT8AQ9H1J5 351 aa15.47■□□□□ 0.07
USH1C-203ENST00000526181 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 CASTP20810 708 aaKnown RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 ADD1P35611 737 aaKnown RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 SEMA3FQ13275 785 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 LAMC2Q13753 1193 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 DGKDQ16760 1214 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 HSDL1Q3SXM5 330 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 CELF3Q5SZQ8 465 aaKnown RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 NFRKBQ6P4R8 1299 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 DEFB123Q8N688 67 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 PPTC7Q8NI37 304 aa15.46■□□□□ 0.07
USH1C-203ENST00000526181 INPP4AQ96PE3 977 aaPredicted RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 V9GY48 417 aaPredicted RBP15.46■□□□□ 0.07
USH1C-203ENST00000526181 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
USH1C-203ENST00000526181 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.06
USH1C-203ENST00000526181 PPIGQ13427 754 aaKnown RBP eCLIP15.45■□□□□ 0.06
USH1C-203ENST00000526181 PCNX4Q63HM2 1172 aa15.45■□□□□ 0.06
USH1C-203ENST00000526181 KCNV1Q6PIU1 500 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms