RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 NAP1L1P55209 391 aaKnown RBP8.84□□□□□ -0.99
BDNF-213ENST00000525950 EHHADHQ08426 723 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 SEPT2Q15019 361 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 NAB2Q15742 525 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 FAM47AQ5JRC9 791 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 KCNV1Q6PIU1 500 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 ARFGAP2Q8N6H7 521 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 CALML4Q96GE6 196 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 MMTAG2Q9BU76 263 aaKnown RBP8.84□□□□□ -0.99
BDNF-213ENST00000525950 CEP72Q9P209 647 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 ZNF233A6NK53 670 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 LRRC53A6NM62 1247 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 PPP1R37O75864 691 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 FCER1AP12319 257 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 SLC7A5Q01650 507 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 NONOQ15233 471 aaKnown RBP eCLIP8.84□□□□□ -0.99
BDNF-213ENST00000525950 OTUD6BQ8N6M0 293 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 CABS1Q96KC9 395 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 ATP6V1G3Q96LB4 118 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 EHD4Q9H223 541 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 IL17RBQ9NRM6 502 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 SALL4Q9UJQ4 1053 aa8.84□□□□□ -0.99
BDNF-213ENST00000525950 ESYT2A0FGR8 921 aa8.83□□□□□ -1
BDNF-213ENST00000525950 EPHB6O15197 1021 aa8.83□□□□□ -1
BDNF-213ENST00000525950 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
BDNF-213ENST00000525950 GNA11P29992 359 aa8.83□□□□□ -1
BDNF-213ENST00000525950 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
BDNF-213ENST00000525950 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 MECOMQ03112 1051 aa8.83□□□□□ -1
BDNF-213ENST00000525950 PTGISQ16647 500 aa8.83□□□□□ -1
BDNF-213ENST00000525950 SLC9C1Q4G0N8 1177 aa8.83□□□□□ -1
BDNF-213ENST00000525950 C10orf76Q5T2E6 689 aa8.83□□□□□ -1
BDNF-213ENST00000525950 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
BDNF-213ENST00000525950 LRRC55Q6ZSA7 311 aa8.83□□□□□ -1
BDNF-213ENST00000525950 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
BDNF-213ENST00000525950 RASGRP4Q8TDF6 673 aa8.83□□□□□ -1
BDNF-213ENST00000525950 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -1
BDNF-213ENST00000525950 ZBTB9Q96C00 473 aa8.83□□□□□ -1
BDNF-213ENST00000525950 PLCB1Q9NQ66 1216 aa8.83□□□□□ -1
BDNF-213ENST00000525950 ATAD5Q96QE3 1844 aa8.83□□□□□ -1
BDNF-213ENST00000525950 GLI1P08151 1106 aa8.83□□□□□ -1
BDNF-213ENST00000525950 NR1D1P20393 614 aa8.83□□□□□ -1
BDNF-213ENST00000525950 MDH1P40925 334 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 C12orf60Q5U649 245 aa8.83□□□□□ -1
BDNF-213ENST00000525950 RRAGAQ7L523 313 aa8.83□□□□□ -1
BDNF-213ENST00000525950 NEK8Q86SG6 692 aa8.83□□□□□ -1
BDNF-213ENST00000525950 INPP4AQ96PE3 977 aaPredicted RBP8.83□□□□□ -1
BDNF-213ENST00000525950 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
BDNF-213ENST00000525950 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 PDCLQ13371 301 aa8.83□□□□□ -1
BDNF-213ENST00000525950 PDIA5Q14554 519 aa8.83□□□□□ -1
BDNF-213ENST00000525950 SLC35G1Q2M3R5 365 aa8.83□□□□□ -1
BDNF-213ENST00000525950 NAA35Q5VZE5 725 aa8.83□□□□□ -1
BDNF-213ENST00000525950 C6orf89Q6UWU4 347 aa8.83□□□□□ -1
BDNF-213ENST00000525950 STAG2Q8N3U4 1231 aa8.83□□□□□ -1
BDNF-213ENST00000525950 ZNF713Q8N859 430 aaPredicted RBP8.83□□□□□ -1
BDNF-213ENST00000525950 RNPC3Q96LT9 517 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 CCDC43Q96MW1 224 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 MMRN2Q9H8L6 949 aa8.83□□□□□ -1
BDNF-213ENST00000525950 XIRP1Q702N8 1843 aaKnown RBP8.83□□□□□ -1
BDNF-213ENST00000525950 BAZ2BQ9UIF8 2168 aaKnown RBP8.82□□□□□ -1
BDNF-213ENST00000525950 CYTH3O43739 400 aa8.82□□□□□ -1
BDNF-213ENST00000525950 HEXIM1O94992 359 aaKnown RBP8.82□□□□□ -1
BDNF-213ENST00000525950 GNA14O95837 355 aa8.82□□□□□ -1
BDNF-213ENST00000525950 FAM107AO95990 144 aa8.82□□□□□ -1
BDNF-213ENST00000525950 SMTNP53814 917 aa8.82□□□□□ -1
BDNF-213ENST00000525950 TNNC1P63316 161 aa8.82□□□□□ -1
BDNF-213ENST00000525950 SETQ01105 290 aaPredicted RBP8.82□□□□□ -1
BDNF-213ENST00000525950 TFAP4Q01664 338 aa8.82□□□□□ -1
BDNF-213ENST00000525950 CUL1Q13616 776 aa8.82□□□□□ -1
BDNF-213ENST00000525950 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ZNF473Q8WTR7 871 aaKnown RBP8.82□□□□□ -1
BDNF-213ENST00000525950 CEP63Q96MT8 703 aa8.82□□□□□ -1
BDNF-213ENST00000525950 MTMR9Q96QG7 549 aa8.82□□□□□ -1
BDNF-213ENST00000525950 TSG101Q99816 390 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ISCUQ9H1K1 167 aa8.82□□□□□ -1
BDNF-213ENST00000525950 TMBIM4Q9HC24 238 aa8.82□□□□□ -1
BDNF-213ENST00000525950 C6orf50Q9HD87 102 aa8.82□□□□□ -1
BDNF-213ENST00000525950 FAM207AQ9NSI2 230 aaPredicted RBP8.82□□□□□ -1
BDNF-213ENST00000525950 BLOC1S4Q9NUP1 217 aa8.82□□□□□ -1
BDNF-213ENST00000525950 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
BDNF-213ENST00000525950 SLC26A4O43511 780 aa8.82□□□□□ -1
BDNF-213ENST00000525950 KCNMA1Q12791 1236 aa8.82□□□□□ -1
BDNF-213ENST00000525950 GRB10Q13322 594 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ITGB3BPQ13352 177 aaPredicted RBP8.82□□□□□ -1
BDNF-213ENST00000525950 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
BDNF-213ENST00000525950 ACTR5Q9H9F9 607 aaPredicted RBP8.82□□□□□ -1
BDNF-213ENST00000525950 EPB41L5Q9HCM4 733 aa8.82□□□□□ -1
BDNF-213ENST00000525950 AIPL1Q9NZN9 384 aa8.82□□□□□ -1
BDNF-213ENST00000525950 CCDC88AQ3V6T2 1871 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ANXA13P27216 316 aa8.82□□□□□ -1
BDNF-213ENST00000525950 RASSF7Q02833 373 aa8.82□□□□□ -1
BDNF-213ENST00000525950 BIRC3Q13489 604 aa8.82□□□□□ -1
BDNF-213ENST00000525950 SLC18A3Q16572 532 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ZCWPW2Q504Y3 356 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ARMC9Q7Z3E5 817 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms