RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 SH3RF1Q7Z6J0 888 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 TDHQ8IZJ6 230 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 COPS5Q92905 334 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 TRIM43Q96BQ3 446 aaPredicted RBP20.19■□□□□ 0.82
NR1H3-228ENST00000525441 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 A6NJR5 290 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 PIK3CDO00329 1044 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 RAG1P15918 1043 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 LY6KQ17RY6 165 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 FBXL16Q8N461 479 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 SLC43A3Q8NBI5 491 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 BRF1Q92994 677 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 MTG1Q9BT17 334 aaPredicted RBP20.18■□□□□ 0.82
NR1H3-228ENST00000525441 PSTPIP2Q9H939 334 aa20.18■□□□□ 0.82
NR1H3-228ENST00000525441 hCG_1642624A0A1W2PR95 340 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
NR1H3-228ENST00000525441 STAM2O75886 525 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 SLC34A2O95436 690 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 METAP2P50579 478 aaKnown RBP eCLIP20.17■□□□□ 0.82
NR1H3-228ENST00000525441 PURAQ00577 322 aaKnown RBP20.17■□□□□ 0.82
NR1H3-228ENST00000525441 APOBRQ0VD83 1088 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 FAM126BQ8IXS8 530 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 BADQ92934 168 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
NR1H3-228ENST00000525441 FRMPD4Q14CM0 1322 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
NR1H3-228ENST00000525441 GNPTABQ3T906 1256 aa20.16■□□□□ 0.82
NR1H3-228ENST00000525441 USP17L6PQ6QN14 398 aa20.16■□□□□ 0.82
NR1H3-228ENST00000525441 IL31RAQ8NI17 732 aa20.16■□□□□ 0.82
NR1H3-228ENST00000525441 PCDH10Q9P2E7 1040 aa20.16■□□□□ 0.82
NR1H3-228ENST00000525441 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
NR1H3-228ENST00000525441 RANBP2P49792 3224 aaKnown RBP20.15■□□□□ 0.82
NR1H3-228ENST00000525441 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 MEIS2O14770 477 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 TGFB3P10600 412 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 PSMC6P62333 389 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 LAMC2Q13753 1193 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 PPP1R18Q6NYC8 613 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 XRRA1Q6P2D8 792 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 RUFY3Q7L099 469 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 DHX37Q8IY37 1157 aaKnown RBP20.15■□□□□ 0.82
NR1H3-228ENST00000525441 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-228ENST00000525441 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 EMID1Q96A84 441 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-228ENST00000525441 AGXT2Q9BYV1 514 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 ZSWIM6Q9HCJ5 1215 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 V9GY48 417 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-228ENST00000525441 KIAA1217Q5T5P2 1943 aa20.15■□□□□ 0.82
NR1H3-228ENST00000525441 LTBP2Q14767 1821 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 GRIN2DO15399 1336 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 RGS20O76081 388 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 TIMP1P01033 207 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 CDC27P30260 824 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 NAPAP54920 295 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 FUT2Q10981 343 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
NR1H3-228ENST00000525441 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.81
NR1H3-228ENST00000525441 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
NR1H3-228ENST00000525441 SPDYE3A6NKU9 549 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 CD4P01730 458 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 MMP3P08254 477 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 DGKDQ16760 1214 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 LRIT3Q3SXY7 679 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 GLT8D2Q9H1C3 349 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 EHMT1Q9H9B1 1298 aa20.13■□□□□ 0.81
NR1H3-228ENST00000525441 NID2Q14112 1375 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 ITGB8P26012 769 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 ADD1P35611 737 aaKnown RBP20.12■□□□□ 0.81
NR1H3-228ENST00000525441 FPGSQ05932 587 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 NFRKBQ6P4R8 1299 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 PPTC7Q8NI37 304 aa20.12■□□□□ 0.81
NR1H3-228ENST00000525441 INPP4AQ96PE3 977 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-228ENST00000525441 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-228ENST00000525441 GGPS1O95749 300 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 ICAM3P32942 547 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 EVCP57679 992 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
NR1H3-228ENST00000525441 AKAP17AQ02040 695 aaKnown RBP20.11■□□□□ 0.81
NR1H3-228ENST00000525441 PTPN11Q06124 597 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-228ENST00000525441 UBE2SQ16763 222 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 NBPF20Q3BBV1 942 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 FAM47CQ5HY64 1035 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 CELF3Q5SZQ8 465 aaKnown RBP20.11■□□□□ 0.81
NR1H3-228ENST00000525441 NLRX1Q86UT6 975 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 ZFP91Q96JP5 570 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-228ENST00000525441 MLXIPQ9HAP2 919 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 BARHL2Q9NY43 387 aa20.11■□□□□ 0.81
NR1H3-228ENST00000525441 FIBPO43427 364 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 B4GALT4O60513 344 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
NR1H3-228ENST00000525441 ADCY7P51828 1080 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 NEDD9Q14511 834 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms