RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 CFAP100Q494V2 611 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 CYP2R1Q6VVX0 501 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 SLC51AQ86UW1 340 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 TEX2Q8IWB9 1127 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 IGSF22Q8N9C0 903 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 CHAMP1Q96JM3 812 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 ZFYVE21Q9BQ24 234 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 CCDC39Q9UFE4 941 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 TCEAL9Q9UHQ7 104 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 ATP8A1Q9Y2Q0 1164 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 RWDD3Q9Y3V2 267 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 M0R2C6 588 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 TBC1D8O95759 1140 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 MSL3P1P0C860 447 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 PYGMP11217 842 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 POU3F2P20265 443 aaPredicted RBP6.48□□□□□ -1.37
USP47-206ENST00000525367 GRK2P25098 689 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 GRK3P35626 688 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 ERVFC1P60507 584 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 IQCEQ6IPM2 695 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 SLCO6A1Q86UG4 719 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 NXPE1Q8N323 547 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 PPM1KQ8N3J5 372 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 CISD2Q8N5K1 135 aaKnown RBP6.48□□□□□ -1.37
USP47-206ENST00000525367 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 MISP3Q96FF7 219 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 KCNJ15Q99712 375 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 JAM3Q9BX67 310 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 GABBR1Q9UBS5 961 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 SLC5A6Q9Y289 635 aa6.48□□□□□ -1.37
USP47-206ENST00000525367 TIMM13Q9Y5L4 95 aaPredicted RBP6.48□□□□□ -1.37
USP47-206ENST00000525367 TRBV23OR9-2A0A075B6M9 112 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 PRC1O43663 620 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 TACR1P25103 407 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 GRIK1P39086 918 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 ID4P47928 161 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 DNM2P50570 870 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 GALK1P51570 392 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 HK2P52789 917 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 RPL11P62913 178 aaKnown RBP6.47□□□□□ -1.37
USP47-206ENST00000525367 PAK1Q13153 545 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 KIZQ2M2Z5 673 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 ANGEL2Q5VTE6 544 aaKnown RBP6.47□□□□□ -1.37
USP47-206ENST00000525367 ALPK1Q96QP1 1244 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 PLCD4Q9BRC7 762 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 CLDND1Q9NY35 253 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 CBLCQ9ULV8 474 aa6.47□□□□□ -1.37
USP47-206ENST00000525367 CCDC66A2RUB6 948 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 TRAF5O00463 557 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 KCNK3O14649 394 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 NPHS1O60500 1241 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 EIF3JO75822 258 aaKnown RBP6.46□□□□□ -1.38
USP47-206ENST00000525367 EYA4O95677 639 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 PRNPP04156 253 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 SPINK2P20155 84 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 ENDOUP21128 410 aaKnown RBP6.46□□□□□ -1.38
USP47-206ENST00000525367 CD97P48960 835 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 TBX4P57082 545 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 LSAMPQ13449 338 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 HSF5Q4G112 596 aaPredicted RBP6.46□□□□□ -1.38
USP47-206ENST00000525367 TIGD5Q53EQ6 642 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 HLA-DQA1Q5Y7H0 255 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 FSTL4Q6MZW2 842 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 CEP128Q6ZU80 1094 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 DTX1Q86Y01 620 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 FLCNQ8NFG4 579 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 PAK6Q9NQU5 681 aaPredicted RBP6.46□□□□□ -1.38
USP47-206ENST00000525367 C19orf73Q9NVV2 129 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 IMPACTQ9P2X3 320 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 TMEM59LQ9UK28 342 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 ADAMTS6Q9UKP5 1117 aa6.46□□□□□ -1.38
USP47-206ENST00000525367 WTIPA6NIX2 430 aaPredicted RBP6.45□□□□□ -1.38
USP47-206ENST00000525367 CBX4O00257 560 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 MYO1BO43795 1136 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 FUCA1P04066 466 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
USP47-206ENST00000525367 RTP1P59025 263 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 EXOSC10Q01780 885 aaKnown RBP6.45□□□□□ -1.38
USP47-206ENST00000525367 TMEM177Q53S58 311 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 UBE2R2Q712K3 238 aaPredicted RBP6.45□□□□□ -1.38
USP47-206ENST00000525367 CEP68Q76N32 757 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
USP47-206ENST00000525367 OVCH1Q7RTY7 1134 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 AHI1Q8N157 1196 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 ATL2Q8NHH9 583 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 WNK4Q96J92 1243 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 MTA3Q9BTC8 594 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 PCMTD2Q9NV79 361 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 LMCD1Q9NZU5 365 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 TNFRSF10DQ9UBN6 386 aa6.45□□□□□ -1.38
USP47-206ENST00000525367 NEMP1O14524 444 aa6.44□□□□□ -1.38
USP47-206ENST00000525367 COL6A2P12110 1019 aa6.44□□□□□ -1.38
USP47-206ENST00000525367 FLT3P36888 993 aa6.44□□□□□ -1.38
USP47-206ENST00000525367 MECP2P51608 486 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms