RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
CD44-215ENST00000525241 PCDHA9Q9Y5H5 950 aa6.46□□□□□ -1.38
CD44-215ENST00000525241 PCDHA8Q9Y5H6 950 aa6.46□□□□□ -1.38
CD44-215ENST00000525241 ARVCFO00192 962 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 ABLIM1O14639 778 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 PAX4O43316 350 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 PEX10O60683 326 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 CDC45O75419 566 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 SOD2P04179 222 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 VIPR1P32241 457 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 GUCY1A3Q02108 690 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 TMEM62Q0P6H9 643 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 MESP2Q0VG99 397 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 TCEA2Q15560 299 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 TKFCQ3LXA3 575 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 PLEKHN1Q494U1 663 aaPredicted RBP6.45□□□□□ -1.38
CD44-215ENST00000525241 SYNPOQ8N3V7 929 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 FMNL2Q96PY5 1086 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 SFMBT1Q9UHJ3 866 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 SIT1Q9Y3P8 196 aa6.45□□□□□ -1.38
CD44-215ENST00000525241 GRK2P25098 689 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 GRK3P35626 688 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 SLC6A11P48066 632 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 PRR5P85299 388 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 SDE2Q6IQ49 451 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 BRAPQ7Z569 592 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 FGD2Q7Z6J4 655 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 MTDHQ86UE4 582 aaKnown RBP6.44□□□□□ -1.38
CD44-215ENST00000525241 PCDH19Q8TAB3 1148 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 PEX11GQ96HA9 241 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 ALG1Q9BT22 464 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 EPB41L1Q9H4G0 881 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 IPPKQ9H8X2 491 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 COA3Q9Y2R0 106 aaPredicted RBP6.44□□□□□ -1.38
CD44-215ENST00000525241 CD2APQ9Y5K6 639 aa6.44□□□□□ -1.38
CD44-215ENST00000525241 FAM47E-STBD1D6RA91 191 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 WNT9AO14904 365 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 SGSM2O43147 1006 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 RFPL3O75679 317 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 RASGRP1O95267 797 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 NAT1P18440 290 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 PAK1Q13153 545 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 OGFOD2Q6N063 350 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 ZC3H14Q6PJT7 736 aaKnown RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 KIAA0907Q7Z7F0 614 aaPredicted RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 DCP2Q8IU60 420 aaKnown RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 FBXO15Q8NCQ5 510 aaPredicted RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD44-215ENST00000525241 TSPAN17Q96FV3 270 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 MAGEB10Q96LZ2 347 aaPredicted RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 DBR1Q9UK59 544 aaKnown RBP6.43□□□□□ -1.38
CD44-215ENST00000525241 NUDT5Q9UKK9 219 aa6.43□□□□□ -1.38
CD44-215ENST00000525241 TCRBV16S1A1N1A0A5B0 115 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 DGKIO75912 1065 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 PABPC4Q13310 644 aaKnown RBP eCLIP6.42□□□□□ -1.38
CD44-215ENST00000525241 PLEKHG4Q58EX7 1191 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 OLFML2BQ68BL8 750 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 SEC14L1Q92503 715 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 KCNJ15Q99712 375 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 CNTD2Q9H8S5 307 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
CD44-215ENST00000525241 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
CD44-215ENST00000525241 TEX51A0A1B0GUA7 166 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 TADA3O75528 432 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 DNAJC8O75937 253 aaPredicted RBP6.41□□□□□ -1.38
CD44-215ENST00000525241 FARP2O94887 1054 aaPredicted RBP6.41□□□□□ -1.38
CD44-215ENST00000525241 ZBTB7AO95365 584 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 COL6A2P12110 1019 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 KCNA6P17658 529 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 SDSP20132 328 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 HSD3B2P26439 372 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 SLC9A5Q14940 896 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 C21orf62-AS1Q17RA5 79 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 EMC4Q5J8M3 183 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 HABP4Q5JVS0 413 aaKnown RBP6.41□□□□□ -1.38
CD44-215ENST00000525241 OTOP3Q7RTS5 596 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 POU5F2Q8N7G0 328 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 FAM84AQ96KN4 292 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 FEZ1Q99689 392 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 SGPP1Q9BX95 441 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 AP5M1Q9H0R1 490 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 GCM1Q9NP62 436 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 SLC6A20Q9NP91 592 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 SIRT5Q9NXA8 310 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 PALD1Q9ULE6 856 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 IRS2Q9Y4H2 1338 aa6.41□□□□□ -1.38
CD44-215ENST00000525241 HGSO14964 777 aaPredicted RBP6.4□□□□□ -1.38
CD44-215ENST00000525241 SEMA7AO75326 666 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 KRT1P04264 644 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 CKMP06732 381 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 SRGAP2CP0DJJ0 459 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 FBLN1P23142 703 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 ZNF200P98182 395 aaPredicted RBP6.4□□□□□ -1.38
CD44-215ENST00000525241 STEAP3Q658P3 488 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 SYDE1Q6ZW31 735 aaPredicted RBP6.4□□□□□ -1.38
CD44-215ENST00000525241 LDHDQ86WU2 507 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms