RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 RAG1P15918 1043 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 CCND2P30279 289 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 CPT1AP50416 773 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 PURAQ00577 322 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 VSIG10LQ86VR7 867 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 FAM126BQ8IXS8 530 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 GPKOWQ92917 476 aaPredicted RBP eCLIP14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 BRF1Q92994 677 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 USP26Q9BXU7 913 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 RBM28Q9NW13 759 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 DDX41Q9UJV9 622 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 MRVI1Q9Y6F6 885 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 TLR3O15455 904 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 RGS20O76081 388 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 GH1P01241 217 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 CDC27P30260 824 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 CHMP4BP1P59074 171 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 ARHGAP1Q07960 439 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 HEATR3Q7Z4Q2 680 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 SLC43A3Q8NBI5 491 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 CUL5Q93034 780 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 MTG1Q9BT17 334 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 TRPV6Q9H1D0 765 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 FAM217BQ9NTX9 383 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 RTEL1Q9NZ71 1219 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 V9GY48 417 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 CNTNAP5Q8WYK1 1306 aa14.81□□□□□ -0.04
TRAPPC4-205ENST00000525079 A6NJR5 290 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 MEIS2O14770 477 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 PSMA5P28066 241 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 ADD1P35611 737 aaKnown RBP14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 FUT2Q10981 343 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 UBE2SQ16763 222 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 PPP1R12CQ9BZL4 782 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 PSTPIP2Q9H939 334 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 TBX21Q9UL17 535 aa14.8□□□□□ -0.04
TRAPPC4-205ENST00000525079 MYH7BA7E2Y1 1941 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 B4GALT4O60513 344 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 TIMP1P01033 207 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 CD4P01730 458 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 MMP3P08254 477 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 METAP2P50579 478 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 EPHB4P54760 987 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 MRPS9P82933 396 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 SP2Q02086 613 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 SHHQ15465 462 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 NBPF20Q3BBV1 942 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 C9orf50Q5SZB4 431 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 WWC2Q6AWC2 1192 aa14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 DHX37Q8IY37 1157 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-205ENST00000525079 PIK3CDO00329 1044 aa14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 KPNA6O60684 536 aa14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 TYW1BQ6NUM6 668 aa14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 ALDH8A1Q9H2A2 487 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 BCAS3Q9H6U6 928 aa14.78□□□□□ -0.04
TRAPPC4-205ENST00000525079 FRMPD4Q14CM0 1322 aa14.77□□□□□ -0.04
TRAPPC4-205ENST00000525079 UMODL1Q5DID0 1318 aa14.77□□□□□ -0.04
TRAPPC4-205ENST00000525079 EPB41L2O43491 1005 aaKnown RBP14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 GGPS1O95749 300 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 CYP2C18P33260 490 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 NAPAP54920 295 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 FPGSQ05932 587 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 LAMC2Q13753 1193 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 KCNV1Q6PIU1 500 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 TRMT13Q9NUP7 481 aaKnown RBP14.77□□□□□ -0.05
TRAPPC4-205ENST00000525079 CYP2C9P11712 490 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 UBA1P22314 1058 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 RCAN1P53805 252 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 CCT2P78371 535 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 DGKDQ16760 1214 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 CELF3Q5SZQ8 465 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 MYSM1Q5VVJ2 828 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 MFSD5Q6N075 450 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 KAT2BQ92831 832 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 SPATA33Q96N06 139 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 HIPK3Q9H422 1215 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 MLXIPQ9HAP2 919 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 PCDHA6Q9UN73 950 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 PCDHA8Q9Y5H6 950 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 CYP46A1Q9Y6A2 500 aa14.76□□□□□ -0.05
TRAPPC4-205ENST00000525079 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
TRAPPC4-205ENST00000525079 SPATA31C2B4DYI2 1134 aa14.75□□□□□ -0.05
TRAPPC4-205ENST00000525079 STXBP3O00186 592 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms