RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TXNRD3Q86VQ6 643 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 DMRTC2Q8IXT2 367 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 ZNF34Q8IZ26 560 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 ZBTB38Q8NAP3 1195 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 LENG1Q96BZ8 264 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 TESK2Q96S53 571 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 RSRP1Q9BUV0 290 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 CLEC4MQ9H2X3 399 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 GABRQQ9UN88 632 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 INPP5FQ9Y2H2 1132 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 CHD6Q8TD26 2715 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 CELA3AP09093 270 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
NEDD8-203ENST00000524927 GBP2P32456 591 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-203ENST00000524927 TNNI2P48788 182 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 FLT3LGP49771 235 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 GPSM2P81274 684 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 ZBED3Q96IU2 234 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-203ENST00000524927 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
NEDD8-203ENST00000524927 SH2B1Q9NRF2 756 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-203ENST00000524927 PRKAG2Q9UGJ0 569 aa9.15□□□□□ -0.94
NEDD8-203ENST00000524927 NUP98P52948 1817 aa9.15□□□□□ -0.95
NEDD8-203ENST00000524927 MYO3BQ8WXR4 1341 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-203ENST00000524927 CDC27P30260 824 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 KCNQ1P51787 676 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
NEDD8-203ENST00000524927 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 PCDH1Q08174 1060 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 FAAP100Q0VG06 881 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 SREK1Q8WXA9 508 aaKnown RBP9.14□□□□□ -0.95
NEDD8-203ENST00000524927 TTC9Q92623 222 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 TP53INP1Q96A56 240 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 UIMC1Q96RL1 719 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 TMEM39AQ9NV64 488 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 SOX13Q9UN79 622 aa9.14□□□□□ -0.95
NEDD8-203ENST00000524927 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-203ENST00000524927 ZNF804BA4D1E1 1349 aa9.13□□□□□ -0.95
NEDD8-203ENST00000524927 ZFHX2Q9C0A1 2572 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-203ENST00000524927 CDC25BP30305 580 aa9.13□□□□□ -0.95
NEDD8-203ENST00000524927 MTHFSDQ2M296 383 aaKnown RBP9.13□□□□□ -0.95
NEDD8-203ENST00000524927 ADAMTSL4Q6UY14 1074 aa9.13□□□□□ -0.95
NEDD8-203ENST00000524927 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
NEDD8-203ENST00000524927 ANKRD11Q6UB99 2663 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-203ENST00000524927 TPRP12270 2363 aaKnown RBP9.13□□□□□ -0.95
NEDD8-203ENST00000524927 LAMB2P55268 1798 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 ENC1O14682 589 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 LIG3P49916 1009 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 TFF2Q03403 129 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 SNAPC2Q13487 334 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 LRP8Q14114 963 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 IKBKEQ14164 716 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 SF3A1Q15459 793 aaKnown RBP9.12□□□□□ -0.95
NEDD8-203ENST00000524927 NBPF12Q5TAG4 269 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-203ENST00000524927 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-203ENST00000524927 VN1R5Q7Z5H4 357 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 FMR1NBQ8N0W7 255 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-203ENST00000524927 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 IL22RA1Q8N6P7 574 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 DRC1Q96MC2 740 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 TMEM74Q96NL1 305 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 TINF2Q9BSI4 451 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 SAMM50Q9Y512 469 aa9.12□□□□□ -0.95
NEDD8-203ENST00000524927 ZNF318Q5VUA4 2279 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 LTBP2Q14767 1821 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-203ENST00000524927 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-203ENST00000524927 ERC2O15083 957 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 KCNQ3O43525 872 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-203ENST00000524927 GRIK5Q16478 980 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 DACT2Q5SW24 774 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 ANKRD23Q86SG2 305 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 KRTAP19-1Q8IUB9 90 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 TIFAQ96CG3 184 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 SPON2Q9BUD6 331 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 KRTAP9-9Q9BYP9 154 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 KRTAP9-4Q9BYQ2 154 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 OTOFQ9HC10 1997 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 SIPA1L3O60292 1781 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-203ENST00000524927 DCHS1Q96JQ0 3298 aa9.11□□□□□ -0.95
NEDD8-203ENST00000524927 HMGCRP04035 888 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 ESRRAP11474 423 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-203ENST00000524927 VGLL4Q14135 290 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 IL17REQ8NFR9 667 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 PRDM12Q9H4Q4 367 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 TLR6Q9Y2C9 796 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 CSADQ9Y600 493 aa9.1□□□□□ -0.95
NEDD8-203ENST00000524927 MGAMO43451 1857 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms