RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 FCER1AP12319 257 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 CNNM4Q6P4Q7 775 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
BEST1-204ENST00000524926 CYP2W1Q8TAV3 490 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 LPAR1Q92633 364 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 KIAA1683Q9H0B3 1180 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
BEST1-204ENST00000524926 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 TBX3O15119 743 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
BEST1-204ENST00000524926 IDEP14735 1019 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 CIITAP33076 1130 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
BEST1-204ENST00000524926 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 ANKRD20A12PQ8NF67 263 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 LENG9Q96B70 501 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 GINM1Q9NU53 330 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 ABCB11O95342 1321 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
BEST1-204ENST00000524926 CYP3A4P08684 503 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 NCAPH2Q6IBW4 605 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 DDX12PQ92771 950 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
BEST1-204ENST00000524926 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 TANGO6Q9C0B7 1094 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
BEST1-204ENST00000524926 KCNJ18B7U540 433 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 MSH4O15457 936 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 UBXN2AP68543 259 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 SPAG1Q07617 926 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 MTMR2Q13614 643 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 KCNJ12Q14500 433 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 KRT31Q15323 416 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 UNC13DQ70J99 1090 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 TRIM47Q96LD4 638 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.33
BEST1-204ENST00000524926 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.33
BEST1-204ENST00000524926 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 POTECB2RU33 542 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 E9PMD0 336 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 LMNB1P20700 586 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 TCP11X2Q5H9J9 407 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 HYIQ5T013 277 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 POTEBQ6S5H4 581 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.32
BEST1-204ENST00000524926 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 CPXCR1Q8N123 301 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 ZKSCAN4Q969J2 545 aaPredicted RBP17.08■□□□□ 0.32
BEST1-204ENST00000524926 C16orf45Q96MC5 204 aaPredicted RBP17.08■□□□□ 0.32
BEST1-204ENST00000524926 VPS16Q9H269 839 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
BEST1-204ENST00000524926 N4BP3O15049 544 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 ICAM1P05362 532 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 SPP2Q13103 211 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 TBX2Q13207 712 aaPredicted RBP17.07■□□□□ 0.32
BEST1-204ENST00000524926 HAUS3Q68CZ6 603 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 SRRTQ9BXP5 876 aaKnown RBP17.07■□□□□ 0.32
BEST1-204ENST00000524926 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
BEST1-204ENST00000524926 LIMA1Q9UHB6 759 aaKnown RBP17.07■□□□□ 0.32
BEST1-204ENST00000524926 MED24O75448 989 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 FLOT1O75955 427 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 PPP1R2P41236 205 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 GPC2Q8N158 579 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
BEST1-204ENST00000524926 TAB2Q9NYJ8 693 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
BEST1-204ENST00000524926 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 LRRC10BA6NIK2 292 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 EPS15P42566 896 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
BEST1-204ENST00000524926 SPIRE1Q08AE8 756 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 SCYL3Q8IZE3 742 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 P2RX5Q93086 422 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 ZNF536O15090 1300 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 VCAM1P19320 739 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 CCNE1P24864 410 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 CSGALNACT2Q8N6G5 542 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 PICK1Q9NRD5 415 aa17.06■□□□□ 0.32
BEST1-204ENST00000524926 EMILIN3Q9NT22 766 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms