RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CR1LQ2VPA4 569 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 TBC1D10BQ4KMP7 808 aaPredicted RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 GTF2IRD2BQ6EKJ0 949 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 MRM1Q6IN84 353 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 VHLLQ6RSH7 139 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 ADAT2Q7Z6V5 191 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 GTF2IRD2Q86UP8 949 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 RIOX2Q8IUF8 465 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 DDX1Q92499 740 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 ZBTB8AQ96BR9 441 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 MBD6Q96DN6 1003 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 C1QTNF3Q9BXJ4 246 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 NKX2-4Q9H2Z4 354 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 ACBD3Q9H3P7 528 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 CYP26B1Q9NR63 512 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 DBR1Q9UK59 544 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 AKT3Q9Y243 479 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 FAN1Q9Y2M0 1017 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 X6R8D5 127 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 CFTRP13569 1480 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 IFT140Q96RY7 1462 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 CEP164Q9UPV0 1460 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 RIMBP3CA6NJZ7 1639 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 RIMBP3BA6NNM3 1639 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 NESP48681 1621 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 RIMBP3Q9UFD9 1639 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 C1QTNF3-AMACRE9PGA6 284 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 NPHS1O60500 1241 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 FPR2P25090 351 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 ADAM17P78536 824 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 ADAM9Q13443 819 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 SF1Q15637 639 aaKnown RBP2.98□□□□□ -1.93
CD44-212ENST00000524922 ZXDCQ2QGD7 858 aaPredicted RBP2.98□□□□□ -1.93
CD44-212ENST00000524922 UBXN11Q5T124 520 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 TEX2Q8IWB9 1127 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 KYQ8NBH2 561 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 MICAL1Q8TDZ2 1067 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 MARCH2Q9P0N8 246 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 NTMQ9P121 344 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 NUDT5Q9UKK9 219 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 MYRFQ9Y2G1 1151 aa2.98□□□□□ -1.93
CD44-212ENST00000524922 ABCC8Q09428 1581 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 B2RBV5 119 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 C22orf46C9J442 243 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 K7ESM1 405 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 MATN3O15232 486 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 CYP2C8P10632 490 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 ZNF28P17035 718 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 ATF4P18848 351 aaPredicted RBP2.97□□□□□ -1.93
CD44-212ENST00000524922 GJA9P57773 515 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 CDSNQ15517 529 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 PPP2R5EQ16537 467 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 FAM26FQ5R3K3 315 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 ETV3LQ6ZN32 361 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 CABP7Q86V35 215 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 ZNF227Q86WZ6 799 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 DCP2Q8IU60 420 aaKnown RBP2.97□□□□□ -1.93
CD44-212ENST00000524922 FAM126BQ8IXS8 530 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 RGS22Q8NE09 1264 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 BTN2A2Q8WVV5 523 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 TGIF2Q9GZN2 237 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 USP40Q9NVE5 1235 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 PALD1Q9ULE6 856 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 NPFFR2Q9Y5X5 522 aa2.97□□□□□ -1.93
CD44-212ENST00000524922 B4GALT3O60512 393 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 TADA3O75528 432 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 PLATP00750 562 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 ITGAVP06756 1048 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 COL6A1P12109 1028 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 LCP1P13796 627 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 INSRRP14616 1297 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 BCL6P41182 706 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 GFRA1P56159 465 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 NCAPHQ15003 741 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 PRSS53Q2L4Q9 553 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 RGL3Q3MIN7 710 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 EMC4Q5J8M3 183 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 SLC35F1Q5T1Q4 408 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 ACBD5Q5T8D3 534 aaPredicted RBP2.96□□□□□ -1.94
CD44-212ENST00000524922 ERICH6BQ5W0A0 696 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 E4F1Q66K89 784 aaPredicted RBP2.96□□□□□ -1.94
CD44-212ENST00000524922 PKN3Q6P5Z2 889 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 POMZP3Q6PJE2 187 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 C6orf15Q6UXA7 325 aaPredicted RBP2.96□□□□□ -1.94
CD44-212ENST00000524922 STK32CQ86UX6 486 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 TTC9BQ8N6N2 239 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 RCBTB1Q8NDN9 531 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 SEC14L1Q92503 715 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 MRRFQ96E11 262 aaKnown RBP2.96□□□□□ -1.94
CD44-212ENST00000524922 APBA2Q99767 749 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 BCL11AQ9H165 835 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 HSPBP1Q9NZL4 362 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 STRIP2Q9ULQ0 834 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 ZNF652Q9Y2D9 606 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 SUGT1Q9Y2Z0 365 aa2.96□□□□□ -1.94
CD44-212ENST00000524922 TCRBV5S2A0A599 114 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 SMAD7O15105 426 aaKnown RBP2.95□□□□□ -1.94
CD44-212ENST00000524922 LRG1P02750 347 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 ZNF20P17024 532 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms