RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 KCNB2Q92953 911 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 DDX41Q9UJV9 622 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 VSIG10LQ86VR7 867 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 CMTR1Q8N1G2 835 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 FANCBQ8NB91 859 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 ANP32EQ9BTT0 268 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 TRPV6Q9H1D0 765 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 TANC1Q9C0D5 1861 aa12.9□□□□□ -0.34
TRAPPC4-204ENST00000524797 B4GALT4O60513 344 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 MMP3P08254 477 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 CCND2P30279 289 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 MICU3Q86XE3 530 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.35
TRAPPC4-204ENST00000524797 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 RGS20O76081 388 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 CYP2C18P33260 490 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 HSPA4P34932 840 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 BRPF3Q9ULD4 1205 aa12.89□□□□□ -0.35
TRAPPC4-204ENST00000524797 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 NOC4LQ9BVI4 516 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 HIPK3Q9H422 1215 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 KCNV1Q6PIU1 500 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 Q7L0L9 218 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 SMARCC2Q8TAQ2 1214 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 CUL5Q93034 780 aa12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 TRMT13Q9NUP7 481 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-204ENST00000524797 GBF1Q92538 1859 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 MEIS2O14770 477 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 ZBTB43O43298 467 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 CPA1P15085 419 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 CSF2RAP15509 400 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 MRPS9P82933 396 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 RTN1Q16799 776 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 USP17L6PQ6QN14 398 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 C16orf59Q7L2K0 433 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.353e-8■■■□□ 16.3
TRAPPC4-204ENST00000524797 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-204ENST00000524797 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 REC8O95072 547 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 TMEM240Q5SV17 173 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 KAT2BQ92831 832 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 SORBS3O60504 671 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 STAM2O75886 525 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 GGPS1O95749 300 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 ACRP10323 421 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 CYP2C9P11712 490 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 ICAM3P32942 547 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 CCL23P55773 120 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 SMAD3P84022 425 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 SP2Q02086 613 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 FUT2Q10981 343 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 DGKDQ16760 1214 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 Q6ZUG5 572 aa12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-204ENST00000524797 TGFB3P10600 412 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms