RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 FBXL16Q8N461 479 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 EMID1Q96A84 441 aaPredicted RBP12.68□□□□□ -0.38
CTSB-207ENST00000524654 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 RBM28Q9NW13 759 aaKnown RBP12.68□□□□□ -0.38
CTSB-207ENST00000524654 MCM3APO60318 1980 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 SZT2Q5T011 3432 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 ZBTB43O43298 467 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 CENPBP07199 599 aaPredicted RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 MYL3P08590 195 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 RCAN1P53805 252 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 EPHB4P54760 987 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 USP17L6PQ6QN14 398 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 CCDC82Q8N4S0 544 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 JAKMIP1Q96N16 626 aaKnown RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 MTG1Q9BT17 334 aaPredicted RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
CTSB-207ENST00000524654 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 LTBP2Q14767 1821 aa12.67□□□□□ -0.38
CTSB-207ENST00000524654 KLF18A0A0U1RQI7 1052 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 hCG_1642624A0A1W2PR95 340 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 B4GALT4O60513 344 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 MMP3P08254 477 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 CCND2P30279 289 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 MRPS9P82933 396 aaKnown RBP12.66□□□□□ -0.38
CTSB-207ENST00000524654 FPGSQ05932 587 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 SHHQ15465 462 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 RTN1Q16799 776 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 C9orf50Q5SZB4 431 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 USP26Q9BXU7 913 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 TRPV6Q9H1D0 765 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 ALDH8A1Q9H2A2 487 aaPredicted RBP12.66□□□□□ -0.38
CTSB-207ENST00000524654 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
CTSB-207ENST00000524654 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 STAM2O75886 525 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 TGFB3P10600 412 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 RPS6KB1P23443 525 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 CDC27P30260 824 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 SP2Q02086 613 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 NBPF20Q3BBV1 942 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 Q6ZUG5 572 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 BRF1Q92994 677 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 CUL5Q93034 780 aa12.65□□□□□ -0.38
CTSB-207ENST00000524654 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CTSB-207ENST00000524654 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.38
CTSB-207ENST00000524654 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 PSMA5P28066 241 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 ICAM3P32942 547 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 FGD1P98174 961 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 DGKDQ16760 1214 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 CELF3Q5SZQ8 465 aaKnown RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 XRRA1Q6P2D8 792 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 C16orf59Q7L2K0 433 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 DHX37Q8IY37 1157 aaKnown RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 KAT2BQ92831 832 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CTSB-207ENST00000524654 NOC4LQ9BVI4 516 aaKnown RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 HIPK3Q9H422 1215 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 TRMT13Q9NUP7 481 aaKnown RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
CTSB-207ENST00000524654 NID2Q14112 1375 aa12.64□□□□□ -0.39
CTSB-207ENST00000524654 UMODL1Q5DID0 1318 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 CSF2RAP15509 400 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
CTSB-207ENST00000524654 CYP2C18P33260 490 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 ADD1P35611 737 aaKnown RBP12.63□□□□□ -0.39
CTSB-207ENST00000524654 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.391e-8■■■■■ 47.9
CTSB-207ENST00000524654 EVCP57679 992 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 RTEL1Q9NZ71 1219 aa12.63□□□□□ -0.39
CTSB-207ENST00000524654 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms