RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 RANBP17Q9H2T7 1088 aaKnown RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 SMCHD1A6NHR9 2005 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 GREB1LQ9C091 1923 aaPredicted RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 ICAM1P05362 532 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 ACRP10323 421 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CSF2RAP15509 400 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CYP2C18P33260 490 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 GRIN2CQ14957 1233 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 RASIP1Q5U651 963 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 WASF1Q92558 559 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 GPCPD1Q9NPB8 672 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
CAPN11-202ENST00000524554 UNC80Q8N2C7 3258 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 FRMPD2Q68DX3 1309 aaPredicted RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 GRXCR1A8MXD5 290 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 NFIBO00712 420 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 CALM1P0DP23 149 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 CALM2P0DP24 149 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 CALM3P0DP25 149 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 SYDE2Q5VT97 1194 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
CAPN11-202ENST00000524554 FBXO16Q8IX29 292 aaPredicted RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 MAFAQ8NHW3 353 aaPredicted RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 ORC3Q9UBD5 711 aaPredicted RBP11.29□□□□□ -0.6
CAPN11-202ENST00000524554 EYSQ5T1H1 3165 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 NID2Q14112 1375 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 MROH7Q68CQ1 1323 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 PDHBP11177 359 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 PBX2P40425 430 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 UBE2HP62256 183 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 PSMC6P62333 389 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 CCDC96Q2M329 555 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
CAPN11-202ENST00000524554 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
CAPN11-202ENST00000524554 TLK2Q86UE8 772 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 TRIM22Q8IYM9 498 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
CAPN11-202ENST00000524554 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 TRPV6Q9H1D0 765 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 Q9Y3F1 56 aa11.28□□□□□ -0.6
CAPN11-202ENST00000524554 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.6
CAPN11-202ENST00000524554 UMODL1Q5DID0 1318 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 CABYRO75952 493 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 DNAJB2P25686 324 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
CAPN11-202ENST00000524554 SSRP1Q08945 709 aaKnown RBP11.27□□□□□ -0.61
CAPN11-202ENST00000524554 PPIGQ13427 754 aaKnown RBP eCLIP11.27□□□□□ -0.61
CAPN11-202ENST00000524554 TRIM29Q14134 588 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 RTN1Q16799 776 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.61
CAPN11-202ENST00000524554 CATIPQ7Z7H3 387 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 MICU3Q86XE3 530 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
CAPN11-202ENST00000524554 ZNF576Q9H609 170 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 PARP14Q460N5 1801 aa11.27□□□□□ -0.61
CAPN11-202ENST00000524554 ZNFX1Q9P2E3 1918 aaKnown RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 TNKSO95271 1327 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 STK36Q9NRP7 1315 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 RBM47A0AV96 593 aaKnown RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 GOLGA6L3A6NEY3 463 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 B4GALT4O60513 344 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 SEC23AQ15436 765 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 ZNF654Q8IZM8 581 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 TBC1D5Q92609 795 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 VTA1Q9NP79 307 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 CXXC1Q9P0U4 656 aaPredicted RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
CAPN11-202ENST00000524554 CDH23Q9H251 3354 aa11.26□□□□□ -0.61
CAPN11-202ENST00000524554 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
CAPN11-202ENST00000524554 TLR3O15455 904 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms