RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 DDX41Q9UJV9 622 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 KLRF2D3W0D1 207 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 CFBP00751 764 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 NR3C2P08235 984 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 IQCF3P0C7M6 154 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 SUPT20HL2P0C7V6 817 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 ANTXR2P58335 489 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 GDF6Q6KF10 455 aaPredicted RBP11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 IL31RAQ8NI17 732 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 DHX38Q92620 1227 aaKnown RBP11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 MAF1Q9H063 256 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 TRANK1O15050 2925 aa11.22□□□□□ -0.61
CNKSR1-209ENST00000524529 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 KPNA6O60684 536 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 GH1P01241 217 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 HOXA13P31271 388 aaPredicted RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 HIC1Q14526 733 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 GRM4Q14833 912 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 RAB30Q15771 203 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 STXBP2Q15833 593 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 ARHGEF16Q5VV41 709 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 CHST3Q7LGC8 479 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 PIGSQ96S52 555 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 RIOX1Q9H6W3 641 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 MSRAQ9UJ68 235 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
CNKSR1-209ENST00000524529 MICAL3Q7RTP6 2002 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 KAT6AQ92794 2004 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 ZBBXA8MT70 800 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 B4DLN1 442 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 E7EWF7 191 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 ZBTB5O15062 677 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 SORBS3O60504 671 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 CHMP4BP1P59074 171 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 SP2Q02086 613 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 TROAPQ12815 778 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 TCTN1Q2MV58 587 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 BRDTQ58F21 947 aaPredicted RBP11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 SESTD1Q86VW0 696 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 PPM1EQ8WY54 764 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 WNT8BQ93098 351 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 GAS2L1Q99501 681 aaPredicted RBP11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 BCAS3Q9H6U6 928 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 PCDHA1Q9Y5I3 950 aa11.2□□□□□ -0.62
CNKSR1-209ENST00000524529 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 HAS3O00219 553 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 EIF3JO75822 258 aaKnown RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 PFKMP08237 780 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 HOXD8P13378 290 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 PGM5Q15124 567 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 PTGISQ16647 500 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 SPRED2Q7Z698 418 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 VSIG10LQ86VR7 867 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 HOMER1Q86YM7 354 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 LSG1Q9H089 658 aaKnown RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 MTIF3Q9H2K0 278 aaKnown RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 SLC28A3Q9HAS3 691 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 PCDHA11Q9Y5I1 949 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-209ENST00000524529 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 RFXAPO00287 272 aa11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 IFIT3O14879 490 aaKnown RBP11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 F2P00734 622 aa11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 RFC2P35250 354 aa11.18□□□□□ -0.62
CNKSR1-209ENST00000524529 PSEN2P49810 448 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms