RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 AFG1LQ8WV93 481 aa21.78■■□□□ 1.08
CTSB-206ENST00000524500 CUL5Q93034 780 aa21.78■■□□□ 1.08
CTSB-206ENST00000524500 TRPV6Q9H1D0 765 aa21.78■■□□□ 1.08
CTSB-206ENST00000524500 DDX41Q9UJV9 622 aaKnown RBP21.78■■□□□ 1.08
CTSB-206ENST00000524500 PLEKHA8P1O95397 391 aa21.77■■□□□ 1.08
CTSB-206ENST00000524500 HMGB1P09429 215 aaKnown RBP21.77■■□□□ 1.08
CTSB-206ENST00000524500 ARHGAP1Q07960 439 aa21.77■■□□□ 1.08
CTSB-206ENST00000524500 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.08
CTSB-206ENST00000524500 FAM47CQ5HY64 1035 aa21.77■■□□□ 1.08
CTSB-206ENST00000524500 NFRKBQ6P4R8 1299 aa21.77■■□□□ 1.08
CTSB-206ENST00000524500 MICU3Q86XE3 530 aa21.77■■□□□ 1.08
CTSB-206ENST00000524500 CASTP20810 708 aaKnown RBP21.76■■□□□ 1.07
CTSB-206ENST00000524500 CYP2C18P33260 490 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 LAMC2Q13753 1193 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 DGKDQ16760 1214 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 NBPF20Q3BBV1 942 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 RAB11FIP4Q86YS3 637 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 DHX37Q8IY37 1157 aaKnown RBP21.76■■□□□ 1.07
CTSB-206ENST00000524500 RASEFQ8IZ41 740 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 SMARCC2Q8TAQ2 1214 aa21.76■■□□□ 1.07
CTSB-206ENST00000524500 BAZ2BQ9UIF8 2168 aaKnown RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 MMP3P08254 477 aa21.75■■□□□ 1.07
CTSB-206ENST00000524500 CSF2RAP15509 400 aa21.75■■□□□ 1.07
CTSB-206ENST00000524500 SMAD3P84022 425 aaKnown RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 EXOSC10Q01780 885 aaKnown RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 FAM109BQ6ICB4 259 aaPredicted RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 Q7L0L9 218 aa21.75■■□□□ 1.07
CTSB-206ENST00000524500 CMTR1Q8N1G2 835 aaKnown RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 EMID1Q96A84 441 aaPredicted RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 RBM28Q9NW13 759 aaKnown RBP21.75■■□□□ 1.07
CTSB-206ENST00000524500 LAMA2P24043 3122 aaKnown RBP21.74■■□□□ 1.07
CTSB-206ENST00000524500 STAM2O75886 525 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 REC8O95072 547 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 TGFB3P10600 412 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 CHMP4BP1P59074 171 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 FGD1P98174 961 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 PTPN11Q06124 597 aaPredicted RBP21.74■■□□□ 1.07
CTSB-206ENST00000524500 ADCK5Q3MIX3 580 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 GNPTABQ3T906 1256 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 PSRC1Q6PGN9 363 aaPredicted RBP21.74■■□□□ 1.07
CTSB-206ENST00000524500 APOA5Q6Q788 366 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 TMTC3Q6ZXV5 915 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 CCDC82Q8N4S0 544 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 IL31RAQ8NI17 732 aa21.74■■□□□ 1.07
CTSB-206ENST00000524500 NOC4LQ9BVI4 516 aaKnown RBP21.74■■□□□ 1.07
CTSB-206ENST00000524500 TRMT13Q9NUP7 481 aaKnown RBP21.74■■□□□ 1.07
CTSB-206ENST00000524500 PIK3CDO00329 1044 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 ZBTB43O43298 467 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 RGS20O76081 388 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 ZNF697Q5TEC3 545 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 PPTC7Q8NI37 304 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 TCEANC2Q96MN5 208 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.73■■□□□ 1.071e-7■■■■■ 39.9
CTSB-206ENST00000524500 PSTPIP2Q9H939 334 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 IL23AQ9NPF7 189 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 NOD1Q9Y239 953 aa21.73■■□□□ 1.07
CTSB-206ENST00000524500 CCL23P55773 120 aa21.72■■□□□ 1.07
CTSB-206ENST00000524500 USP17L6PQ6QN14 398 aa21.72■■□□□ 1.07
CTSB-206ENST00000524500 KATNAL1Q9BW62 490 aa21.72■■□□□ 1.07
CTSB-206ENST00000524500 MTMR10Q9NXD2 777 aa21.72■■□□□ 1.07
CTSB-206ENST00000524500 FRMPD4Q14CM0 1322 aa21.72■■□□□ 1.07
CTSB-206ENST00000524500 KIAA1217Q5T5P2 1943 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 ACRP10323 421 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 CYP2C9P11712 490 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 HSPA4P34932 840 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 RTN1Q16799 776 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 TMEM240Q5SV17 173 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 CELF3Q5SZQ8 465 aaKnown RBP21.71■■□□□ 1.07
CTSB-206ENST00000524500 XRRA1Q6P2D8 792 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 RPUSD2Q8IZ73 545 aaKnown RBP21.71■■□□□ 1.07
CTSB-206ENST00000524500 KCNB2Q92953 911 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 SPATA33Q96N06 139 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 MTIF3Q9H2K0 278 aaKnown RBP21.71■■□□□ 1.07
CTSB-206ENST00000524500 MLXIPQ9HAP2 919 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 UMODL1Q5DID0 1318 aa21.71■■□□□ 1.07
CTSB-206ENST00000524500 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.7■■□□□ 1.06
CTSB-206ENST00000524500 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.7■■□□□ 1.06
CTSB-206ENST00000524500 MEIS2O14770 477 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 PPFIA4O75335 1185 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 GGPS1O95749 300 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 MYSM1Q5VVJ2 828 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 ZNF365Q70YC5 407 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 C16orf59Q7L2K0 433 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 HEATR3Q7Z4Q2 680 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
CTSB-206ENST00000524500 JAKMIP1Q96N16 626 aaKnown RBP21.7■■□□□ 1.06
CTSB-206ENST00000524500 BRPF3Q9ULD4 1205 aa21.7■■□□□ 1.06
CTSB-206ENST00000524500 NAP1L2Q9ULW6 460 aaPredicted RBP21.7■■□□□ 1.06
CTSB-206ENST00000524500 SCN10AQ9Y5Y9 1956 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 KLF18A0A0U1RQI7 1052 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 hCG_1642624A0A1W2PR95 340 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 GOLGA8AA7E2F4 631 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 GOLGA8BA8MQT2 603 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 FGBP02675 491 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 UBA1P22314 1058 aaKnown RBP21.69■■□□□ 1.06
CTSB-206ENST00000524500 RCAN1P53805 252 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 MRPS9P82933 396 aaKnown RBP21.69■■□□□ 1.06
CTSB-206ENST00000524500 PCNX4Q63HM2 1172 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
CTSB-206ENST00000524500 RETREG2Q8NC44 543 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms