RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PPFIBP1	Q86W92	1011 aa		6.35	□□□□□ -1.39
PCM1-223	ENST00000524356	ZNF503	Q96F45	646 aa		6.35	□□□□□ -1.39
PCM1-223	ENST00000524356	KBTBD4	Q9NVX7	518 aa		6.35	□□□□□ -1.39
PCM1-223	ENST00000524356	ARAP1	Q96P48	1450 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	DPT	Q07507	201 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	ARHGEF18	Q6ZSZ5	1173 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	MIB1	Q86YT6	1006 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	AMER2	Q8N7J2	671 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	MRRF	Q96E11	262 aa	Known RBP	6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	YTHDC1	Q96MU7	727 aa	Known RBP	6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	FAM161B	Q96MY7	647 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	MCMBP	Q9BTE3	642 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	JADE2	Q9NQC1	790 aa		6.34	□□□□□ -1.39
PCM1-223	ENST00000524356	CEP164	Q9UPV0	1460 aa		6.34	□□□□□ -1.4
PCM1-223	ENST00000524356	ZNF202	O95125	648 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	CYP1A1	P04798	512 aa	Predicted RBP	6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	ADAM9	Q13443	819 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	KRTAP15-1	Q3LI76	137 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	ANKRD39	Q53RE8	183 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	PRAMEF18	Q5VWM3	479 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	SLFN13	Q68D06	897 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	RNF207	Q6ZRF8	634 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	DHRS1	Q96LJ7	313 aa		6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.33	□□□□□ -1.4
PCM1-223	ENST00000524356	NARS	O43776	548 aa	Known RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	NTRK1	P04629	796 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	PMS1	P54277	932 aa	Known RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	EAPP	Q56P03	285 aa	Predicted RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	KBTBD2	Q8IY47	623 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	USP33	Q8TEY7	942 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	ZDHHC15	Q96MV8	337 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	TRIM8	Q9BZR9	551 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	NOL6	Q9H6R4	1146 aa	Known RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	COPRS	Q9NQ92	184 aa		6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	SF3B6	Q9Y3B4	125 aa	Known RBP	6.32	□□□□□ -1.4
PCM1-223	ENST00000524356	CD247	P20963	164 aa		6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	EEF1DP3	Q658K8	133 aa		6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	TMC4	Q7Z404	712 aa		6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	REXO1	Q8N1G1	1221 aa	Known RBP	6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	DLL4	Q9NR61	685 aa		6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	ZNF451	Q9Y4E5	1061 aa		6.31	□□□□□ -1.4
PCM1-223	ENST00000524356	SEZ6	Q53EL9	994 aa		6.3	□□□□□ -1.4
PCM1-223	ENST00000524356	CPNE8	Q86YQ8	564 aa		6.3	□□□□□ -1.4
PCM1-223	ENST00000524356	NAF1	Q96HR8	494 aa	Known RBP	6.3	□□□□□ -1.4
PCM1-223	ENST00000524356	TMEM168	Q9H0V1	697 aa		6.3	□□□□□ -1.4
PCM1-223	ENST00000524356	ZFR2	Q9UPR6	939 aa	Known RBP	6.3	□□□□□ -1.4
PCM1-223	ENST00000524356	AQR	O60306	1485 aa	Known RBP eCLIP	6.29	□□□□□ -1.4	1e-6	■■□□□ 12.1
PCM1-223	ENST00000524356	CFTR	P13569	1480 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	AURKA	O14965	403 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	PPM1G	O15355	546 aa	Predicted RBP	6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	SGSM2	O43147	1006 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	IL13	P35225	146 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	EIF4A3	P38919	411 aa	Known RBP	6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	ERMP1	Q7Z2K6	904 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	ZC3H18	Q86VM9	953 aa	Known RBP	6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	DNAJC10	Q8IXB1	793 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	SMARCC1	Q92922	1105 aa	Predicted RBP	6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	UBP1	Q9NZI7	540 aa		6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.29	□□□□□ -1.4
PCM1-223	ENST00000524356	B4GALT4	O60513	344 aa		6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	ZNF16	P17020	682 aa	Predicted RBP	6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	STAT5A	P42229	794 aa		6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	INTS3	Q68E01	1043 aa	Known RBP	6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	L2HGDH	Q9H9P8	463 aa		6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	FAM86C1	Q9NVL1	165 aa		6.28	□□□□□ -1.4
PCM1-223	ENST00000524356	WIZ	O95785	1651 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	STXBP3	O00186	592 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	FUCA1	P04066	466 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	TCF3	P15923	654 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	MLLT6	P55198	1093 aa	Predicted RBP	6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	PRKD1	Q15139	912 aa	Predicted RBP	6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	CR1L	Q2VPA4	569 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	NRN1L	Q496H8	165 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	DCP2	Q8IU60	420 aa	Known RBP	6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	PLEKHO2	Q8TD55	490 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.27	□□□□□ -1.41
PCM1-223	ENST00000524356	ZSWIM3	Q96MP5	696 aa		6.27	□□□□□ -1.41
PCM1-223	ENST00000524356		A0A087X1B8	175 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	FOXS1	O43638	330 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	TP53	P04637	393 aa	Predicted RBP	6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	MCM4	P33991	863 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	DGCR2	P98153	550 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	PPP2R5D	Q14738	602 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	FAM126B	Q8IXS8	530 aa		6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	ZCCHC14	Q8WYQ9	949 aa	Known RBP	6.26	□□□□□ -1.41
PCM1-223	ENST00000524356	C7orf72	A4D263	438 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	ITGA4	P13612	1032 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	MCM7	P33993	719 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	INHBC	P55103	352 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	PTH1R	Q03431	593 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	USP39	Q53GS9	565 aa	Known RBP	6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	DHX37	Q8IY37	1157 aa	Known RBP	6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	SREK1	Q8WXA9	508 aa	Known RBP	6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	SPATA32	Q96LK8	384 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	C8orf37	Q96NL8	207 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	GNRHR2	Q96P88	292 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	ADO	Q96SZ5	270 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms