RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CCDC171Q6TFL3 1326 aa26.64■■□□□ 1.85
PVT1-218ENST00000523328 CXCL10P02778 98 aa26.63■■□□□ 1.85
PVT1-218ENST00000523328 DEFB103AP81534 67 aa26.63■■□□□ 1.85
PVT1-218ENST00000523328 CDC37Q16543 378 aaPredicted RBP26.63■■□□□ 1.85
PVT1-218ENST00000523328 LRRC8DQ7L1W4 858 aa26.63■■□□□ 1.85
PVT1-218ENST00000523328 NSUN6Q8TEA1 469 aaKnown RBP26.63■■□□□ 1.85
PVT1-218ENST00000523328 ZKSCAN3Q9BRR0 538 aa26.63■■□□□ 1.85
PVT1-218ENST00000523328 ZBTB47Q9UFB7 747 aaPredicted RBP26.63■■□□□ 1.85
PVT1-218ENST00000523328 LAMA4Q16363 1823 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 NBNO60934 754 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 TCTN1Q2MV58 587 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 CNKSR3Q6P9H4 555 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 CHST3Q7LGC8 479 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 DGKHQ86XP1 1220 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 GTF2IRD1Q9UHL9 959 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 SIP14410 1827 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 ABCB11O95342 1321 aa26.62■■□□□ 1.85
PVT1-218ENST00000523328 PARNO95453 639 aaKnown RBP26.61■■□□□ 1.85
PVT1-218ENST00000523328 CKBP12277 381 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 CASTP20810 708 aaKnown RBP26.61■■□□□ 1.85
PVT1-218ENST00000523328 GDPD5Q8WTR4 605 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 ESR2Q92731 530 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 IWS1Q96ST2 819 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 LRFN3Q9BTN0 628 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 RNF41Q9H4P4 317 aaPredicted RBP26.61■■□□□ 1.85
PVT1-218ENST00000523328 LMCD1Q9NZU5 365 aa26.61■■□□□ 1.85
PVT1-218ENST00000523328 STXBP2Q15833 593 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 DGKDQ16760 1214 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 ADGRF4Q8IZF3 695 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 PNMA1Q8ND90 353 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 RMDN3Q96TC7 470 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 ZBED2Q9BTP6 218 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 HDAC6Q9UBN7 1215 aa26.6■■□□□ 1.85
PVT1-218ENST00000523328 DDX41Q9UJV9 622 aaKnown RBP26.6■■□□□ 1.85
PVT1-218ENST00000523328 RBAK-RBAKDNI3L0D1 243 aa26.59■■□□□ 1.85
PVT1-218ENST00000523328 GJB5O95377 273 aa26.59■■□□□ 1.85
PVT1-218ENST00000523328 EMID1Q96A84 441 aaPredicted RBP26.59■■□□□ 1.85
PVT1-218ENST00000523328 ABHD14A-ACY1A0A1B0GW23 586 aa26.58■■□□□ 1.85
PVT1-218ENST00000523328 PSEN2P49810 448 aa26.58■■□□□ 1.85
PVT1-218ENST00000523328 TRAF7Q6Q0C0 670 aa26.58■■□□□ 1.85
PVT1-218ENST00000523328 MCF2L2Q86YR7 1114 aa26.58■■□□□ 1.85
PVT1-218ENST00000523328 KHSRPQ92945 711 aaKnown RBP eCLIP26.58■■□□□ 1.85
PVT1-218ENST00000523328 SUGCTQ9HAC7 445 aa26.58■■□□□ 1.85
PVT1-218ENST00000523328 HAS3O00219 553 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 ERVK-21P61565 698 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 TRIM71Q2Q1W2 868 aaKnown RBP26.57■■□□□ 1.84
PVT1-218ENST00000523328 QRICH1Q2TAL8 776 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 C7orf31Q8N865 590 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 ANKS1AQ92625 1134 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 WNT8BQ93098 351 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 RAD9AQ99638 391 aa26.57■■□□□ 1.84
PVT1-218ENST00000523328 F2P00734 622 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 PTK7Q13308 1070 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 MFSD10Q14728 455 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 ALG1Q9BT22 464 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 KATNAL1Q9BW62 490 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 MTUS1Q9ULD2 1270 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 MRPL11Q9Y3B7 192 aaKnown RBP26.56■■□□□ 1.84
PVT1-218ENST00000523328 MICAL3Q7RTP6 2002 aa26.56■■□□□ 1.84
PVT1-218ENST00000523328 LINC01553A4QN01 128 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 TRIM6-TRIM34B2RNG4 842 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 KDM4AO75164 1064 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 EIF3JO75822 258 aaKnown RBP26.55■■□□□ 1.84
PVT1-218ENST00000523328 EIF2AK2P19525 551 aaKnown RBP26.55■■□□□ 1.84
PVT1-218ENST00000523328 MBTPS1Q14703 1052 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 KIAA0753Q2KHM9 967 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 ASPRV1Q53RT3 343 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 CCDC178Q5BJE1 867 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 ARHGEF16Q5VV41 709 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 IQCA1Q86XH1 822 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 PPTC7Q8NI37 304 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 TGS1Q96RS0 853 aaKnown RBP26.55■■□□□ 1.84
PVT1-218ENST00000523328 KAT14Q9H8E8 782 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 C11orf16Q9NQ32 467 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 PXMP2Q9NR77 195 aa26.55■■□□□ 1.84
PVT1-218ENST00000523328 ARIH1Q9Y4X5 557 aaPredicted RBP26.55■■□□□ 1.84
PVT1-218ENST00000523328 ZNF213O14771 459 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 EFCAB14O75071 495 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 NR3C2P08235 984 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 ZNF286BP0CG31 522 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 HOXD8P13378 290 aaPredicted RBP26.54■■□□□ 1.84
PVT1-218ENST00000523328 HOXD11P31277 338 aaPredicted RBP26.54■■□□□ 1.84
PVT1-218ENST00000523328 NT5C2P49902 561 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 HDAC1Q13547 482 aaPredicted RBP26.54■■□□□ 1.84
PVT1-218ENST00000523328 LAMC2Q13753 1193 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 IKBKEQ14164 716 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 TMEM31Q5JXX7 168 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 ZNF618Q5T7W0 954 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 FBXO11Q86XK2 927 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 JMJD4Q9H9V9 463 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 CD320Q9NPF0 282 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 MRVI1Q9Y6F6 885 aa26.54■■□□□ 1.84
PVT1-218ENST00000523328 OPLAHO14841 1288 aa26.53■■□□□ 1.84
PVT1-218ENST00000523328 MFAP1P55081 439 aaKnown RBP26.53■■□□□ 1.84
PVT1-218ENST00000523328 ZNF200P98182 395 aaPredicted RBP26.53■■□□□ 1.84
PVT1-218ENST00000523328 ENAHQ8N8S7 591 aaPredicted RBP26.53■■□□□ 1.84
PVT1-218ENST00000523328 RILPL2Q969X0 211 aa26.53■■□□□ 1.84
PVT1-218ENST00000523328 ZSCAN10Q96SZ4 725 aaPredicted RBP26.53■■□□□ 1.84
PVT1-218ENST00000523328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.52■■□□□ 1.84
PVT1-218ENST00000523328 B4E1Z4 1266 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms