RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 KRT23Q9C075 422 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 THEGQ9P2T0 379 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 PCDHA11Q9Y5I1 949 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 KPNA6O60684 536 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
MRPS28-209ENST00000522987 ZNF286BP0CG31 522 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 ACTN1P12814 892 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 HOXA13P31271 388 aaPredicted RBP17.98■□□□□ 0.47
MRPS28-209ENST00000522987 STXBP2Q15833 593 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 KRT40Q6A162 431 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 SPRED2Q7Z698 418 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
MRPS28-209ENST00000522987 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 KLRF2D3W0D1 207 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 OPLAHO14841 1288 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
MRPS28-209ENST00000522987 MCF2L2Q86YR7 1114 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 PIBF1Q8WXW3 757 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 KAT2BQ92831 832 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 SENP2Q9HC62 589 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 MRVI1Q9Y6F6 885 aa17.97■□□□□ 0.47
MRPS28-209ENST00000522987 SPTBN5Q9NRC6 3674 aaKnown RBP17.96■□□□□ 0.47
MRPS28-209ENST00000522987 NR3C2P08235 984 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 PFKMP08237 780 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
MRPS28-209ENST00000522987 BFSP2Q13515 415 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 AAMPQ13685 434 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 SEC23AQ15436 765 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 SKIV2LQ15477 1246 aaKnown RBP17.96■□□□□ 0.47
MRPS28-209ENST00000522987 IL31RAQ8NI17 732 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
MRPS28-209ENST00000522987 CTAGE1Q96RT6 745 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 HDAC6Q9UBN7 1215 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 DDX41Q9UJV9 622 aaKnown RBP17.96■□□□□ 0.47
MRPS28-209ENST00000522987 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
MRPS28-209ENST00000522987 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
MRPS28-209ENST00000522987 PSEN2P49810 448 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 ZNF200P98182 395 aaPredicted RBP17.95■□□□□ 0.46
MRPS28-209ENST00000522987 TFF2Q03403 129 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 PTH1RQ03431 593 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 PTPN11Q06124 597 aaPredicted RBP17.95■□□□□ 0.46
MRPS28-209ENST00000522987 SLC35G1Q2M3R5 365 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 TCTN1Q2MV58 587 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 ARNTL2Q8WYA1 636 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
MRPS28-209ENST00000522987 ASB2Q96Q27 587 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 IWS1Q96ST2 819 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 MAD2L2Q9UI95 211 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
MRPS28-209ENST00000522987 KAT6AQ92794 2004 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 RFC2P35250 354 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 DGKDQ16760 1214 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 TTC22Q5TAA0 569 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 HERC6Q8IVU3 1022 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 DHX37Q8IY37 1157 aaKnown RBP17.94■□□□□ 0.46
MRPS28-209ENST00000522987 ADAMTS19Q8TE59 1207 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 NECAB3Q96P71 396 aaPredicted RBP17.94■□□□□ 0.46
MRPS28-209ENST00000522987 PIGSQ96S52 555 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 SLC9A7Q96T83 725 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 MICAL3Q7RTP6 2002 aa17.94■□□□□ 0.46
MRPS28-209ENST00000522987 TNFRSF10AO00220 468 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 IFIT3O14879 490 aaKnown RBP17.93■□□□□ 0.46
MRPS28-209ENST00000522987 KCNJ6P48051 423 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 HSD17B4P51659 736 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 DEFB103AP81534 67 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 MRPS5P82675 430 aaKnown RBP17.93■□□□□ 0.46
MRPS28-209ENST00000522987 MFSD10Q14728 455 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 GPNMBQ14956 572 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 FAM117BQ6P1L5 589 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 LRRC8DQ7L1W4 858 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 CCDC155Q8N6L0 562 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 C7orf31Q8N865 590 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
MRPS28-209ENST00000522987 WNT8BQ93098 351 aa17.93■□□□□ 0.46
MRPS28-209ENST00000522987 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
MRPS28-209ENST00000522987 LCHNA4D1U4 455 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 ZBTB5O15062 677 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 EIF3JO75822 258 aaKnown RBP17.92■□□□□ 0.46
MRPS28-209ENST00000522987 RGS20O76081 388 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 GGPS1O95749 300 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 CYP21A2P08686 494 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 TAP1Q03518 808 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 HIC1Q14526 733 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 GTF2IRD1Q9UHL9 959 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 SIP14410 1827 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 TRANK1O15050 2925 aa17.92■□□□□ 0.46
MRPS28-209ENST00000522987 PALM3A6NDB9 673 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms