RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 RAD54LQ92698 747 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 DDX12PQ92771 950 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 NUP58Q9BVL2 599 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 MARCH6O60337 910 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 RAB21Q9UL25 225 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 PLIN4Q96Q06 1357 aa18.15■□□□□ 0.5
SMG1P3-206ENST00000522841 PNMA6FA0A0J9YX94 578 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 MACROD2A1Z1Q3 448 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 H3BQF6 201 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 PSMD14O00487 310 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 SSBP05455 408 aaKnown RBP eCLIP18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 FKBP15Q5T1M5 1219 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 KRT79Q5XKE5 535 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 HAS1Q92839 578 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 DBNDD1Q9H9R9 158 aa18.14■□□□□ 0.5
SMG1P3-206ENST00000522841 LTBP1Q14766 1721 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 MYH7BA7E2Y1 1941 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 ZNF263O14978 683 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 CYLC1P35663 651 aaPredicted RBP18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 KRT83P78385 493 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 CCDC155Q8N6L0 562 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 MMS19Q96T76 1030 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 RIC8AQ9NPQ8 531 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 MYH4Q9Y623 1939 aa18.14■□□□□ 0.49
SMG1P3-206ENST00000522841 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 SMCR8Q8TEV9 937 aaPredicted RBP18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 TSPYL1Q9H0U9 437 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 NDST4Q9H3R1 872 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 MMRN2Q9H8L6 949 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 TBC1D7Q9P0N9 293 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 STK17AQ9UEE5 414 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 DDX25Q9UHL0 483 aaKnown RBP18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 MAP2K7O14733 419 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 SNAP25P60880 206 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 PROM2Q8N271 834 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 RETREG2Q8NC44 543 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L15C9J2P7 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L13C9JLJ4 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L11C9JVI0 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L18D6R9N7 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L22D6RA61 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L17D6RBQ6 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L19D6RCP7 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L20D6RJB6 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 ZNF185O15231 689 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L24Q0WX57 530 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 USP17L6PQ6QN14 398 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 TRPC5Q9UL62 973 aaPredicted RBP18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 SAR1BQ9Y6B6 198 aa18.13■□□□□ 0.49
SMG1P3-206ENST00000522841 PVALEFA0A1B0GWK0 134 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 EIF3CLB5ME19 914 aaKnown RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 hCG_1984214I3L0E3 225 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 ORC2Q13416 577 aaPredicted RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 PDIA5Q14554 519 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 APOBEC3HQ6NTF7 200 aaKnown RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 ZNF713Q8N859 430 aaPredicted RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 EIF3CQ99613 913 aaKnown RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 FGFBP2Q9BYJ0 223 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 PDE11AQ9HCR9 933 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 SIK3Q9Y2K2 1263 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 MYH10P35580 1976 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 KLRG2A4D1S0 409 aaPredicted RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 KRT86O43790 486 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 HNRNPLLQ8WVV9 542 aaKnown RBP18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 CUL5Q93034 780 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 CCDC42Q96M95 316 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 RASSF4Q9H2L5 321 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 L1RE1Q9UN81 338 aa18.12■□□□□ 0.49
SMG1P3-206ENST00000522841 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 POTEB2H3BUK9 544 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 IPO7O95373 1038 aaKnown RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 PPP1R2P41236 205 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 CLK2P49760 499 aaKnown RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 COBLL1Q53SF7 1204 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 GUF1Q8N442 669 aaKnown RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 ARHGAP20Q9P2F6 1191 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 N4BP1O75113 896 aaKnown RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 HLA-DOAP06340 250 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 RBM5P52756 815 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■■■□□ 15.3
SMG1P3-206ENST00000522841 TMEM119Q4V9L6 283 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 DNAJC18Q9H819 358 aa18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
SMG1P3-206ENST00000522841 NPHP3-ACAD11A0A0J9YXS1 232 aa18.1■□□□□ 0.49
SMG1P3-206ENST00000522841 E9PMD0 336 aa18.1■□□□□ 0.49
SMG1P3-206ENST00000522841 ZBTB5O15062 677 aa18.1■□□□□ 0.49
SMG1P3-206ENST00000522841 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms