RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TSPYL6Q8N831 410 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
VPS13B-211ENST00000522802 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 GADD45BO75293 160 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 PTPRAP18433 802 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 CDC27P30260 824 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 FGD1P98174 961 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 FOXO4P98177 505 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 GRM2Q14416 872 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 NOL9Q5SY16 702 aaKnown RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 DCAF15Q66K64 600 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 FAM109BQ6ICB4 259 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 FAM83AQ86UY5 434 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 WFDC8Q8IUA0 241 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 GLIS3Q8NEA6 775 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 TEKT1Q969V4 418 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 RUNDC1Q96C34 613 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 CDX2Q99626 313 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-211ENST00000522802 LACRTQ9GZZ8 138 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 EHD4Q9H223 541 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 LIN7BQ9HAP6 207 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 IFT57Q9NWB7 429 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 REV3LO60673 3130 aa8.01□□□□□ -1.13
VPS13B-211ENST00000522802 BDP1A6H8Y1 2624 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 A0A0G2JLL6 359 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 HMGCRP04035 888 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 GRIA4P48058 902 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 TAGLNQ01995 201 aaKnown RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 CHAF1AQ13111 956 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 IFIT5Q13325 482 aaKnown RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 LRRC26Q2I0M4 334 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 EPHA10Q5JZY3 1008 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 APOBEC3HQ6NTF7 200 aaKnown RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 PRRT2Q7Z6L0 340 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 ANKRD13CQ8N6S4 541 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 BSNDQ8WZ55 320 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 FAM84BQ96KN1 310 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 ZDHHC15Q96MV8 337 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 BCO2Q9BYV7 579 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 MUC3BQ9H195 1237 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 SH2B1Q9NRF2 756 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 TMOD2Q9NZR1 351 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 FRMD4AQ9P2Q2 1039 aaPredicted RBP8□□□□□ -1.13
VPS13B-211ENST00000522802 ZNF112Q9UJU3 913 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 SOX13Q9UN79 622 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 PPME1Q9Y570 386 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
VPS13B-211ENST00000522802 METTL12A8MUP2 240 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 CAPN2P17655 700 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 HIBADHP31937 336 aaKnown RBP7.99□□□□□ -1.13
VPS13B-211ENST00000522802 PLA2G5P39877 138 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 TCP10Q12799 353 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 NFIAQ12857 509 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 FKBP1CQ5VVH2 108 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 GADL1Q6ZQY3 521 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 DTWD1Q8N5C7 304 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 SMCR8Q8TEV9 937 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-211ENST00000522802 MYLIPQ8WY64 445 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 TRIB2Q92519 343 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 HOOK2Q96ED9 719 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 OSBPL7Q9BZF2 842 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 NOP53Q9NZM5 478 aaKnown RBP7.99□□□□□ -1.13
VPS13B-211ENST00000522802 OGDHLQ9ULD0 1010 aa7.99□□□□□ -1.13
VPS13B-211ENST00000522802 A0A096LPE4 126 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 A0A0A0MRY4 1105 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 A0A1W2PPZ6 126 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 SPDYE3A6NKU9 549 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 GIPC1O14908 333 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 COL6A1P12109 1028 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 EPHA1P21709 976 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 COL8A1P27658 744 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 GNAI1P63096 354 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 HDLBPQ00341 1268 aaKnown RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 SPRED3Q2MJR0 410 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 TREML2Q5T2D2 321 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 NXPE4Q6UWF7 544 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 LMBR1LQ6UX01 489 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 LDHAL6AQ6ZMR3 332 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 VN1R5Q7Z5H4 357 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 USP38Q8NB14 1042 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 TSR2Q969E8 191 aaKnown RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 COA7Q96BR5 231 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 FRMD6Q96NE9 622 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 DUSP9Q99956 384 aaKnown RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 PUS3Q9BZE2 481 aaKnown RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 TTYH1Q9H313 450 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-211ENST00000522802 MYH16Q9H6N6 1097 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 ABCB6Q9NP58 842 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 CNNM1Q9NRU3 951 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 XIRP2A4UGR9 3374 aa7.98□□□□□ -1.13
VPS13B-211ENST00000522802 CHD9Q3L8U1 2897 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 499.2 ms