RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 FBXO16Q8IX29 292 aaPredicted RBP25.23■■□□□ 1.63
HOXA3-205ENST00000522456 PCSK9Q8NBP7 692 aaKnown RBP25.23■■□□□ 1.63
HOXA3-205ENST00000522456 ELP1O95163 1332 aa25.22■■□□□ 1.63
HOXA3-205ENST00000522456 CCT2P78371 535 aaKnown RBP25.22■■□□□ 1.63
HOXA3-205ENST00000522456 IRX5P78411 483 aaPredicted RBP25.22■■□□□ 1.63
HOXA3-205ENST00000522456 GHRHRQ02643 423 aa25.22■■□□□ 1.63
HOXA3-205ENST00000522456 HEATR3Q7Z4Q2 680 aa25.22■■□□□ 1.63
HOXA3-205ENST00000522456 UPF3AQ9H1J1 476 aaKnown RBP25.22■■□□□ 1.63
HOXA3-205ENST00000522456 ASGR1P07306 291 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 GJA9P57773 515 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 TNFAIP2Q03169 654 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 NOL8Q76FK4 1167 aaKnown RBP25.21■■□□□ 1.63
HOXA3-205ENST00000522456 FCHSD1Q86WN1 690 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 MAFAQ8NHW3 353 aaPredicted RBP25.21■■□□□ 1.63
HOXA3-205ENST00000522456 IL17RAQ96F46 866 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 ZNF274Q96GC6 653 aaPredicted RBP25.21■■□□□ 1.63
HOXA3-205ENST00000522456 COL25A1Q9BXS0 654 aaPredicted RBP25.21■■□□□ 1.63
HOXA3-205ENST00000522456 PDGFCQ9NRA1 345 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 TBX21Q9UL17 535 aa25.21■■□□□ 1.63
HOXA3-205ENST00000522456 TMEM265A0A087WTH1 108 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 TIMP1P01033 207 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 EIF2AK2P19525 551 aaKnown RBP25.2■■□□□ 1.62
HOXA3-205ENST00000522456 EDNRBP24530 442 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 IQSEC1Q6DN90 963 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 TAPT1Q6NXT6 567 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 MYLIPQ8WY64 445 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 GPKOWQ92917 476 aaPredicted RBP eCLIP25.2■■□□□ 1.62
HOXA3-205ENST00000522456 CUL5Q93034 780 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 IWS1Q96ST2 819 aa25.2■■□□□ 1.62
HOXA3-205ENST00000522456 ALDH8A1Q9H2A2 487 aaPredicted RBP25.2■■□□□ 1.62
HOXA3-205ENST00000522456 NID2Q14112 1375 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 STK3Q13188 491 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 GNASQ5JWF2 1037 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 SMARCC2Q8TAQ2 1214 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 VTI1AQ96AJ9 217 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 PSTPIP2Q9H939 334 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 NCOA5Q9HCD5 579 aaKnown RBP25.19■■□□□ 1.62
HOXA3-205ENST00000522456 PXMP2Q9NR77 195 aa25.19■■□□□ 1.62
HOXA3-205ENST00000522456 A0A0U1RQG5 324 aaPredicted RBP25.18■■□□□ 1.62
HOXA3-205ENST00000522456 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.18■■□□□ 1.62
HOXA3-205ENST00000522456 CDK7P50613 346 aa25.18■■□□□ 1.62
HOXA3-205ENST00000522456 NEK4P51957 841 aa25.18■■□□□ 1.62
HOXA3-205ENST00000522456 ANKRD1Q15327 319 aa25.18■■□□□ 1.62
HOXA3-205ENST00000522456 STXBP2Q15833 593 aa25.18■■□□□ 1.62
HOXA3-205ENST00000522456 FOSL2P15408 326 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 AK2P54819 239 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 NKX3-2P78367 333 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 AKAP17AQ02040 695 aaKnown RBP25.17■■□□□ 1.62
HOXA3-205ENST00000522456 WWC2Q6AWC2 1192 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 MFSD5Q6N075 450 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 USP17L6PQ6QN14 398 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 PHKBQ93100 1093 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 Q9Y3F1 56 aa25.17■■□□□ 1.62
HOXA3-205ENST00000522456 ARVCFO00192 962 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 NR3C2P08235 984 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 MYCLP12524 364 aaPredicted RBP25.16■■□□□ 1.62
HOXA3-205ENST00000522456 SMPD1P17405 629 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 NAPAP54920 295 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 TLK2Q86UE8 772 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 C22orf23Q9BZE7 217 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 WDR11Q9BZH6 1224 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 AP5M1Q9H0R1 490 aa25.16■■□□□ 1.62
HOXA3-205ENST00000522456 GNEQ9Y223 722 aaKnown RBP25.16■■□□□ 1.62
HOXA3-205ENST00000522456 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 PIK3CDO00329 1044 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 MEIS2O14770 477 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 CPLX1O14810 134 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 CTAGE5O15320 804 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 PRPF3O43395 683 aaKnown RBP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 PPFIA3O75145 1194 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 IFNAR1P17181 557 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 PPIGQ13427 754 aaKnown RBP eCLIP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 NTRK3Q16288 839 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 PDCD2LQ9BRP1 358 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 SLC26A6Q9BXS9 759 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 UPF2Q9HAU5 1272 aaKnown RBP25.15■■□□□ 1.62
HOXA3-205ENST00000522456 VCANP13611 3396 aa25.15■■□□□ 1.62
HOXA3-205ENST00000522456 RBM47A0AV96 593 aaKnown RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 hCG_1984214I3L0E3 225 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 TLR3O15455 904 aaKnown RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 EIF3JO75822 258 aaKnown RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 SCG2P13521 617 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 DNAJB2P25686 324 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 BEX3Q00994 111 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 PGM5Q15124 567 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 PFKFB3Q16875 520 aaPredicted RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 TMEM63BQ5T3F8 832 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 FAM126BQ8IXS8 530 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 ZNF713Q8N859 430 aaPredicted RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 SCFD2Q8WU76 684 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 SLKQ9H2G2 1235 aaPredicted RBP25.14■■□□□ 1.62
HOXA3-205ENST00000522456 BARHL2Q9NY43 387 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 TPCN1Q9ULQ1 816 aa25.14■■□□□ 1.62
HOXA3-205ENST00000522456 PRUNE2Q8WUY3 3088 aa25.14■■□□□ 1.61
HOXA3-205ENST00000522456 STXBP3O00186 592 aa25.13■■□□□ 1.61
HOXA3-205ENST00000522456 DYNC1LI2O43237 492 aaPredicted RBP25.13■■□□□ 1.61
HOXA3-205ENST00000522456 ZEB2O60315 1214 aa25.13■■□□□ 1.61
HOXA3-205ENST00000522456 DUSP28Q4G0W2 176 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms