RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 DACT1Q9NYF0 836 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CTDP1Q9Y5B0 961 aaPredicted RBP10.82□□□□□ -0.68
SHPRH-209ENST00000521977 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
SHPRH-209ENST00000521977 SPDYE3A6NKU9 549 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 NFIBO00712 420 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 TDP2O95551 362 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 CFBP00751 764 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 ALAS1P13196 640 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 HOXA13P31271 388 aaPredicted RBP10.81□□□□□ -0.68
SHPRH-209ENST00000521977 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
SHPRH-209ENST00000521977 NDUFA8P51970 172 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 ARHGAP4P98171 946 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 PABPC4Q13310 644 aaKnown RBP eCLIP10.81□□□□□ -0.68
SHPRH-209ENST00000521977 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 MUM1L1Q5H9M0 696 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 RBM43Q6ZSC3 357 aaKnown RBP10.81□□□□□ -0.68
SHPRH-209ENST00000521977 CPXCR1Q8N123 301 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 TRERF1Q96PN7 1200 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 TEX13BQ9BXU2 312 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 GZF1Q9H116 711 aaPredicted RBP10.81□□□□□ -0.68
SHPRH-209ENST00000521977 CLSTN2Q9H4D0 955 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 RIPK3Q9Y572 518 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 FRMPD4Q14CM0 1322 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 RPTORQ8N122 1335 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 PASKQ96RG2 1323 aa10.81□□□□□ -0.68
SHPRH-209ENST00000521977 SLC37A4O43826 429 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 CNMDO75829 334 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
SHPRH-209ENST00000521977 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
SHPRH-209ENST00000521977 GTF2A2P52657 109 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 Q4G0T1 1027 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 SPRYD7Q5W111 196 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 ASCC2Q9H1I8 757 aaPredicted RBP10.8□□□□□ -0.68
SHPRH-209ENST00000521977 NUP62CLQ9H1M0 184 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 RNF146Q9NTX7 359 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 BTBD7Q9P203 1132 aa10.8□□□□□ -0.68
SHPRH-209ENST00000521977 VWA3AA6NCI4 1184 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 ZNF202O95125 648 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 CETPP11597 493 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 OSBPP22059 807 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 STAT3P40763 770 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 HERVK_113P62684 666 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 SNRNP48Q6IEG0 339 aaKnown RBP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 USP49Q70CQ1 688 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 RIOX2Q8IUF8 465 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 ELOA2Q8IYF1 753 aaPredicted RBP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 SYTL5Q8TDW5 730 aaPredicted RBP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 HAS1Q92839 578 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 LENG9Q96B70 501 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 EHMT1Q9H9B1 1298 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 KCNMB3Q9NPA1 279 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 FAM13BQ9NYF5 915 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 COL20A1Q9P218 1284 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 DDX25Q9UHL0 483 aaKnown RBP10.79□□□□□ -0.68
SHPRH-209ENST00000521977 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
SHPRH-209ENST00000521977 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 TBX3O15119 743 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 CTAGE5O15320 804 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 KINO60870 393 aaKnown RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 SYKP43405 635 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 RPS6P62753 249 aaKnown RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 CALCRLQ16602 461 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 LRSAM1Q6UWE0 723 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 ANKRD23Q86SG2 305 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 CHST13Q8NET6 341 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 ETNPPLQ8TBG4 499 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 BRI3BPQ8WY22 251 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 EPSTI1Q96J88 318 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 AK8Q96MA6 479 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 FUCA2Q9BTY2 467 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 SPATC1LQ9H0A9 340 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 ACAD9Q9H845 621 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 GPBP1L1Q9HC44 474 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-209ENST00000521977 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 KCNH3Q9ULD8 1083 aa10.78□□□□□ -0.68
SHPRH-209ENST00000521977 IGLV3-22A0A075B6J6 115 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 A0A087X0B3 334 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 SYCE3A1L190 88 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 BTBD19C9JJ37 291 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 FAM86B1E9PN63 330 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 FAM86B2P0C5J1 330 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 HUNKP57058 714 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 PDIA5Q14554 519 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 SLC30A10Q6XR72 485 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 RNF207Q6ZRF8 634 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 SAPCD2Q86UD0 394 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 RASAL3Q86YV0 1011 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 CCSER1Q9C0I3 900 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms