RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RGS20O76081 388 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 MYL3P08590 195 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 RAG1P15918 1043 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 RTN1Q16799 776 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 USP17L6PQ6QN14 398 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 Q6ZUG5 572 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 ZFP91Q96JP5 570 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 FAM217BQ9NTX9 383 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 TBX21Q9UL17 535 aa20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 MEIS2O14770 477 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 GH1P01241 217 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 CD4P01730 458 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 RPS6KB1P23443 525 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 FGD1P98174 961 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 ARHGAP1Q07960 439 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 FUT2Q10981 343 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 BRDTQ58F21 947 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 MRVI1Q9Y6F6 885 aa20.62■□□□□ 0.89
TRAPPC9-211ENST00000521700 CNTNAP5Q8WYK1 1306 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 GOLGA8AA7E2F4 631 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 GOLGA8BA8MQT2 603 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 TLR3O15455 904 aaKnown RBP20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 KPNA6O60684 536 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 PSMA5P28066 241 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 CDC27P30260 824 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 CCND2P30279 289 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 APOBRQ0VD83 1088 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 FBXL16Q8N461 479 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 SMARCC2Q8TAQ2 1214 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 AFG1LQ8WV93 481 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 SEZ6LQ9BYH1 1024 aa20.61■□□□□ 0.89
TRAPPC9-211ENST00000521700 FRMPD4Q14CM0 1322 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 TIMP1P01033 207 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 RCAN1P53805 252 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 LRIT3Q3SXY7 679 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 BRF1Q92994 677 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 CUL5Q93034 780 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 LRCH3Q96II8 777 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 PSTPIP2Q9H939 334 aa20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 V9GY48 417 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-211ENST00000521700 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 ADD1P35611 737 aaKnown RBP20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 SHHQ15465 462 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 GPKOWQ92917 476 aaPredicted RBP eCLIP20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 AGXT2Q9BYV1 514 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 TRPV6Q9H1D0 765 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 MYH7BA7E2Y1 1941 aa20.59■□□□□ 0.89
TRAPPC9-211ENST00000521700 SCN10AQ9Y5Y9 1956 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 MMP3P08254 477 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 EPHB4P54760 987 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 SP2Q02086 613 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 LAMC2Q13753 1193 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 C9orf50Q5SZB4 431 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 WWC2Q6AWC2 1192 aa20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 EMID1Q96A84 441 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 ALDH8A1Q9H2A2 487 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-211ENST00000521700 B4GALT4O60513 344 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 TGFB3P10600 412 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 FPGSQ05932 587 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 MFSD5Q6N075 450 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 DHX37Q8IY37 1157 aaKnown RBP20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPP1R13LQ8WUF5 828 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 ZSWIM6Q9HCJ5 1215 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
TRAPPC9-211ENST00000521700 LAMA3Q16787 3333 aa20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 STAM2O75886 525 aa20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 UBE2SQ16763 222 aa20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 CELF3Q5SZQ8 465 aaKnown RBP20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 TYW1BQ6NUM6 668 aa20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 INPP4AQ96PE3 977 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC9-211ENST00000521700 CCDC196A0A1B0GTZ2 297 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 SORBS3O60504 671 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 GGPS1O95749 300 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 UBA1P22314 1058 aaKnown RBP20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 ICAM3P32942 547 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 CYP2C18P33260 490 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 DGKDQ16760 1214 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 FAM47CQ5HY64 1035 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 PCNX4Q63HM2 1172 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 XRRA1Q6P2D8 792 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPTC7Q8NI37 304 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 KAT2BQ92831 832 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 TM6SF1Q9BZW5 370 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 BCAS3Q9H6U6 928 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 TRMT13Q9NUP7 481 aaKnown RBP20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 SZT2Q5T011 3432 aa20.55■□□□□ 0.88
TRAPPC9-211ENST00000521700 SPATA31C2B4DYI2 1134 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 NAPAP54920 295 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms