RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, human

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-216	ENST00000521477	FBXO16	Q8IX29	292 aa	Predicted RBP	13.61	□□□□□ -0.23
DENND3-216	ENST00000521477	EMID1	Q96A84	441 aa	Predicted RBP	13.61	□□□□□ -0.23
DENND3-216	ENST00000521477	AP5M1	Q9H0R1	490 aa		13.61	□□□□□ -0.23
DENND3-216	ENST00000521477	GNE	Q9Y223	722 aa	Known RBP	13.61	□□□□□ -0.23
DENND3-216	ENST00000521477	hCG_1642624	A0A1W2PR95	340 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	KPNA6	O60684	536 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	ADAMTS4	O75173	837 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	CABYR	O75952	493 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	ICAM3	P32942	547 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	SREBF1	P36956	1147 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	CPT1A	P50416	773 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	USP17L6P	Q6QN14	398 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	GPRASP2	Q96D09	838 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	INPP4A	Q96PE3	977 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	WDR11	Q9BZH6	1224 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	BRMS1	Q9HCU9	246 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	ORC3	Q9UBD5	711 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	PCDHA6	Q9UN73	950 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	PCDHA8	Q9Y5H6	950 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	SYNRG	Q9UMZ2	1314 aa		13.6	□□□□□ -0.23
DENND3-216	ENST00000521477	FIBP	O43427	364 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	ADCYAP1R1	P41586	468 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	NLRP5	P59047	1200 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	LRRC41	Q15345	812 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	TYW1B	Q6NUM6	668 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	CCDC62	Q6P9F0	684 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	NIPA1	Q7RTP0	329 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	TLK2	Q86UE8	772 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	NSUN7	Q8NE18	718 aa	Known RBP	13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	KLHDC9	Q8NEP7	349 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	PURB	Q96QR8	312 aa	Known RBP	13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	SENP7	Q9BQF6	1050 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	ANO3	Q9BYT9	981 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	C11orf49	Q9H6J7	331 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	PCDHA4	Q9UN74	947 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	PHF24	Q9UPV7	400 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	BRCA2	P51587	3418 aa		13.59	□□□□□ -0.23
DENND3-216	ENST00000521477	GH1	P01241	217 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	CYP3A4	P08684	503 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	TXN	P10599	105 aa	Known RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	COL6A1	P12109	1028 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	SMPD1	P17405	629 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	SET	Q01105	290 aa	Predicted RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	MLLT1	Q03111	559 aa	Predicted RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	TRIM29	Q14134	588 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	NEDD9	Q14511	834 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	C1orf53	Q5VUE5	145 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	NOL8	Q76FK4	1167 aa	Known RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	NAP1L4	Q99733	375 aa	Known RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	LARP6	Q9BRS8	491 aa	Known RBP	13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	POLR3E	Q9NVU0	708 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	MRVI1	Q9Y6F6	885 aa		13.58	□□□□□ -0.24
DENND3-216	ENST00000521477	CAPN15	O75808	1086 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	LARGE1	O95461	756 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	CTDNEP1	O95476	244 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	C6orf222	P0C671	652 aa	Predicted RBP	13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	MYCL	P12524	364 aa	Predicted RBP	13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	LAMC2	Q13753	1193 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	UBE2S	Q16763	222 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	EEPD1	Q7L9B9	569 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	KRT25	Q7Z3Z0	450 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	BLID	Q8IZY5	108 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	OR6J1	Q8NGC5	347 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	ALG1	Q9BT22	464 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	PHF20	Q9BVI0	1012 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	VPS54	Q9P1Q0	977 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	DDX41	Q9UJV9	622 aa	Known RBP	13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.57	□□□□□ -0.24
DENND3-216	ENST00000521477	ELP1	O95163	1332 aa		13.57	□□□□□ -0.24
DENND3-216	ENST00000521477		A6NJR5	290 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	MNX1	P50219	401 aa	Predicted RBP	13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	USP11	P51784	963 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	MRPS9	P82933	396 aa	Known RBP	13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	ARHGAP4	P98171	946 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	FSCN1	Q16658	493 aa	Known RBP	13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	MOXD1	Q6UVY6	613 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	SEPT14	Q6ZU15	432 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	CCDC83	Q8IWF9	413 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	NECAB1	Q8N987	351 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	IL31RA	Q8NI17	732 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	PAWR	Q96IZ0	340 aa	Known RBP	13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	GLT1D1	Q96MS3	346 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	PDGFC	Q9NRA1	345 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	UBIAD1	Q9Y5Z9	338 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	MROH7	Q68CQ1	1323 aa		13.56	□□□□□ -0.24
DENND3-216	ENST00000521477	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	SPATA31C2	B4DYI2	1134 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	RGS20	O76081	388 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	PGK1	P00558	417 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	CIITA	P33076	1130 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	MTMR1	Q13613	665 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	SAFB	Q15424	915 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	CEP55	Q53EZ4	464 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	GNAS	Q5JWF2	1037 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	FAM184A	Q8NB25	1140 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	PPTC7	Q8NI37	304 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	CRYGN	Q8WXF5	182 aa		13.55	□□□□□ -0.24
DENND3-216	ENST00000521477	TMX3	Q96JJ7	454 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms