RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 VTI1AQ96AJ9 217 aa23.76■■□□□ 1.39
TRIM35-203ENST00000521253 ZFP91Q96JP5 570 aaPredicted RBP23.76■■□□□ 1.39
TRIM35-203ENST00000521253 LARP6Q9BRS8 491 aaKnown RBP23.76■■□□□ 1.39
TRIM35-203ENST00000521253 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
TRIM35-203ENST00000521253 CABYRO75952 493 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 CPT1AP50416 773 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 NAPAP54920 295 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 CCT2P78371 535 aaKnown RBP23.75■■□□□ 1.39
TRIM35-203ENST00000521253 UBE2SQ16763 222 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 PRO3102Q9H379 93 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 NCOA5Q9HCD5 579 aaKnown RBP23.75■■□□□ 1.39
TRIM35-203ENST00000521253 DDX41Q9UJV9 622 aaKnown RBP23.75■■□□□ 1.39
TRIM35-203ENST00000521253 MRVI1Q9Y6F6 885 aa23.75■■□□□ 1.39
TRIM35-203ENST00000521253 A0A0U1RQG5 324 aaPredicted RBP23.74■■□□□ 1.39
TRIM35-203ENST00000521253 STXBP3O00186 592 aa23.74■■□□□ 1.39
TRIM35-203ENST00000521253 MRPS9P82933 396 aaKnown RBP23.74■■□□□ 1.39
TRIM35-203ENST00000521253 NTRK3Q16288 839 aa23.74■■□□□ 1.39
TRIM35-203ENST00000521253 PPP1R18Q6NYC8 613 aa23.74■■□□□ 1.39
TRIM35-203ENST00000521253 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
TRIM35-203ENST00000521253 BARHL2Q9NY43 387 aa23.74■■□□□ 1.39
TRIM35-203ENST00000521253 A6NJR5 290 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 hCG_1984214I3L0E3 225 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 GH1P01241 217 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 MAGEA10P43363 369 aaPredicted RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 CDK7P50613 346 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 PFKFB3Q16875 520 aaPredicted RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 BRDTQ58F21 947 aaPredicted RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 ANKRD33Q7Z3H0 272 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 ZNF713Q8N859 430 aaPredicted RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 PHKBQ93100 1093 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 IL17RAQ96F46 866 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 GDF15Q99988 308 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 PRDM5Q9NQX1 630 aaPredicted RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
TRIM35-203ENST00000521253 PRKAG2Q9UGJ0 569 aa23.73■■□□□ 1.39
TRIM35-203ENST00000521253 ARVCFO00192 962 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 PRPF3O43395 683 aaKnown RBP23.72■■□□□ 1.39
TRIM35-203ENST00000521253 PPFIA3O75145 1194 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 MYL3P08590 195 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 C8orf34Q49A92 452 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 SH3RF1Q7Z6J0 888 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 ZNF274Q96GC6 653 aaPredicted RBP23.72■■□□□ 1.39
TRIM35-203ENST00000521253 TOX2Q96NM4 488 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 RIC8AQ9NPQ8 531 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 POLR3EQ9NVU0 708 aa23.72■■□□□ 1.39
TRIM35-203ENST00000521253 GRIN2DO15399 1336 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 CLTBP09497 229 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 SCG2P13521 617 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 IFNAR1P17181 557 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 PSMC6P62333 389 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 PURAQ00577 322 aaKnown RBP23.71■■□□□ 1.39
TRIM35-203ENST00000521253 PKN1Q16512 942 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 PCNX4Q63HM2 1172 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 KCNV1Q6PIU1 500 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 AFG1LQ8WV93 481 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 INPP4AQ96PE3 977 aaPredicted RBP23.71■■□□□ 1.39
TRIM35-203ENST00000521253 RTEL1Q9NZ71 1219 aa23.71■■□□□ 1.39
TRIM35-203ENST00000521253 TRIOBPQ9H2D6 2365 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 TRIM43BA6NCK2 446 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 SMCO2A6NFE2 343 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 SPDYE3A6NKU9 549 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 STAM2O75886 525 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 ADCY7P51828 1080 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 MDM2Q00987 491 aaPredicted RBP23.7■■□□□ 1.38
TRIM35-203ENST00000521253 FAAP100Q0VG06 881 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 ITGA7Q13683 1181 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 HABP4Q5JVS0 413 aaKnown RBP23.7■■□□□ 1.38
TRIM35-203ENST00000521253 XRRA1Q6P2D8 792 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 SLC43A3Q8NBI5 491 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 TRIM43Q96BQ3 446 aaPredicted RBP23.7■■□□□ 1.38
TRIM35-203ENST00000521253 SLC26A6Q9BXS9 759 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 RNF26Q9BY78 433 aaPredicted RBP23.7■■□□□ 1.38
TRIM35-203ENST00000521253 ALDH8A1Q9H2A2 487 aaPredicted RBP23.7■■□□□ 1.38
TRIM35-203ENST00000521253 PCDHA6Q9UN73 950 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 PCDHA8Q9Y5H6 950 aa23.7■■□□□ 1.38
TRIM35-203ENST00000521253 MROH7Q68CQ1 1323 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 DCDC2CA8MYV0 355 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 UBA1P22314 1058 aaKnown RBP23.69■■□□□ 1.38
TRIM35-203ENST00000521253 AKAP17AQ02040 695 aaKnown RBP23.69■■□□□ 1.38
TRIM35-203ENST00000521253 SP2Q02086 613 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 STK3Q13188 491 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 GNPTABQ3T906 1256 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 TEX2Q8IWB9 1127 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 EMID1Q96A84 441 aaPredicted RBP23.69■■□□□ 1.38
TRIM35-203ENST00000521253 MTG1Q9BT17 334 aaPredicted RBP23.69■■□□□ 1.38
TRIM35-203ENST00000521253 KIAA1217Q5T5P2 1943 aa23.69■■□□□ 1.38
TRIM35-203ENST00000521253 KPNA6O60684 536 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 MMP3P08254 477 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 TGFB3P10600 412 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 LAMC2Q13753 1193 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 FAM126BQ8IXS8 530 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 DHX37Q8IY37 1157 aaKnown RBP23.68■■□□□ 1.38
TRIM35-203ENST00000521253 TMEM39AQ9NV64 488 aa23.68■■□□□ 1.38
TRIM35-203ENST00000521253 SORBS3O60504 671 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 GGPS1O95749 300 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 ICAM3P32942 547 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 BMP8BP34820 402 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 AK2P54819 239 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 SEMA3FQ13275 785 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms