RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SH2B1Q9NRF2 756 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 CUL9Q8IWT3 2517 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 CDH23Q9H251 3354 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 ASTN1O14525 1302 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 SOWAHBA6NEL2 793 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 DCDC2CA8MYV0 355 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 STXBP3O00186 592 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 PPFIA3O75145 1194 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 C6orf222P0C671 652 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-222ENST00000520948 SCG2P13521 617 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 SSRP1Q08945 709 aaKnown RBP20.88■□□□□ 0.93
VEGFA-222ENST00000520948 ACVR2BQ13705 512 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 CPLX2Q6PUV4 134 aaKnown RBP20.88■□□□□ 0.93
VEGFA-222ENST00000520948 SLC30A10Q6XR72 485 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 ANKRD33Q7Z3H0 272 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 ZNF467Q7Z7K2 595 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-222ENST00000520948 GPKOWQ92917 476 aaPredicted RBP eCLIP20.88■□□□□ 0.939e-7■□□□□ 11
VEGFA-222ENST00000520948 PURBQ96QR8 312 aaKnown RBP20.88■□□□□ 0.93
VEGFA-222ENST00000520948 BARHL2Q9NY43 387 aa20.88■□□□□ 0.93
VEGFA-222ENST00000520948 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
VEGFA-222ENST00000520948 MOXD2PA6NHM9 499 aa20.87■□□□□ 0.93
VEGFA-222ENST00000520948 DUSP11O75319 330 aaKnown RBP20.87■□□□□ 0.93
VEGFA-222ENST00000520948 MCM2P49736 904 aa20.87■□□□□ 0.93
VEGFA-222ENST00000520948 CCDC144BQ3MJ40 725 aa20.87■□□□□ 0.93
VEGFA-222ENST00000520948 CCSAPQ6IQ19 270 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-222ENST00000520948 SYTL5Q8TDW5 730 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-222ENST00000520948 COL20A1Q9P218 1284 aa20.87■□□□□ 0.93
VEGFA-222ENST00000520948 STK36Q9NRP7 1315 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 MEIS2O14770 477 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 CDKL5O76039 1030 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 DEXIO95424 95 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 FDPSP14324 419 aaKnown RBP20.86■□□□□ 0.93
VEGFA-222ENST00000520948 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 TRIM22Q8IYM9 498 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
VEGFA-222ENST00000520948 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 TOX2Q96NM4 488 aa20.86■□□□□ 0.93
VEGFA-222ENST00000520948 PIK3CDO00329 1044 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 CFBP00751 764 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 ASGR1P07306 291 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 FOSL2P15408 326 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 CALML3P27482 149 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 AKAP17AQ02040 695 aaKnown RBP20.85■□□□□ 0.93
VEGFA-222ENST00000520948 PPP1R18Q6NYC8 613 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 MORC4Q8TE76 937 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 VTI1AQ96AJ9 217 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 TMX3Q96JJ7 454 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 TAAR1Q96RJ0 339 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
VEGFA-222ENST00000520948 ABHD16BQ9H3Z7 469 aa20.85■□□□□ 0.93
VEGFA-222ENST00000520948 LRRC37A2A6NM11 1700 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 LOC102724159A0A0B4J2E5 919 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 GCOM1H8Y6P7 765 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-222ENST00000520948 DTNBO60941 627 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 POLR2MP0CAP2 368 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 CST5P28325 142 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-222ENST00000520948 PWP2Q15269 919 aaKnown RBP20.84■□□□□ 0.93
VEGFA-222ENST00000520948 TEX2Q8IWB9 1127 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 DNERQ8NFT8 737 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 SMARCC2Q8TAQ2 1214 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 PSTPIP2Q9H939 334 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 SPC25Q9HBM1 224 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 TBX21Q9UL17 535 aa20.84■□□□□ 0.93
VEGFA-222ENST00000520948 ESYT2A0FGR8 921 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 TIMP1P01033 207 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 HOXA13P31271 388 aaPredicted RBP20.83■□□□□ 0.93
VEGFA-222ENST00000520948 NAPAP54920 295 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 GNASQ5JWF2 1037 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 PCSK9Q8NBP7 692 aaKnown RBP20.83■□□□□ 0.93
VEGFA-222ENST00000520948 ZMYND12Q9H0C1 365 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 UPF3AQ9H1J1 476 aaKnown RBP20.83■□□□□ 0.93
VEGFA-222ENST00000520948 RIC8AQ9NPQ8 531 aa20.83■□□□□ 0.93
VEGFA-222ENST00000520948 ELP1O95163 1332 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 MROH7Q68CQ1 1323 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 SMCO2A6NFE2 343 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 ALDH5A1P51649 535 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 GJA9P57773 515 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 BEX3Q00994 111 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 USP17L6PQ6QN14 398 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 FAM177A1Q8N128 213 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 SNX21Q969T3 373 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 AIFM3Q96NN9 605 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.82■□□□□ 0.921e-12■■■□□ 14.8
VEGFA-222ENST00000520948 KATNBL1Q9H079 304 aa20.82■□□□□ 0.92
VEGFA-222ENST00000520948 ORC3Q9UBD5 711 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 ADD3Q9UEY8 706 aaKnown RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 DDX49Q9Y6V7 483 aaKnown RBP20.82■□□□□ 0.92
VEGFA-222ENST00000520948 ASB14A6NK59 587 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 JAK2O60674 1132 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 PTGS1P23219 599 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 EDNRBP24530 442 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 DNAJB2P25686 324 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 CDK7P50613 346 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 PPP1R12CQ9BZL4 782 aa20.81■□□□□ 0.92
VEGFA-222ENST00000520948 TMEM265A0A087WTH1 108 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms