RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	FXR1	P51114	621 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	SESN3	P58005	492 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	GPR85	P60893	370 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	TRIM14	Q14142	442 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	TMEM240	Q5SV17	173 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	OVCH1	Q7RTY7	1134 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	CPXCR1	Q8N123	301 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	GJA10	Q969M2	543 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	TEKT5	Q96M29	485 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	TAAR9	Q96RI9	348 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	KCNJ15	Q99712	375 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	NAA15	Q9BXJ9	866 aa	Known RBP	4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	IPPK	Q9H8X2	491 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	CASS4	Q9NQ75	786 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHA2	Q9Y5H9	948 aa		4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.54	□□□□□ -1.68
SREK1-208	ENST00000520580	KAT6B	Q8WYB5	2073 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	MEFV	O15553	781 aa	Predicted RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	SNRPB	P14678	240 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CAP2	P40123	477 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CTSK	P43235	329 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	MECP2	P51608	486 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	SOX4	Q06945	474 aa	Predicted RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CREB3L3	Q68CJ9	461 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	LBX2	Q6XYB7	198 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	ACAD11	Q709F0	780 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	SCLT1	Q96NL6	688 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CYP4F12	Q9HCS2	524 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	NLRC4	Q9NPP4	1024 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	GPR27	Q9NS67	375 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CBLC	Q9ULV8	474 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	ZNF652	Q9Y2D9	606 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	BACE2	Q9Y5Z0	518 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580		A0A0U1RQG5	324 aa	Predicted RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580		F5H423	210 aa	Predicted RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	EPX	P11678	715 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	OSM	P13725	252 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	NAT1	P18440	290 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	KRT15	P19012	456 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	RXRB	P28702	533 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	ECE1	P42892	770 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	GPR3	P46089	330 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	POU4F1	Q01851	419 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	PDCD1	Q15116	288 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	RRP12	Q5JTH9	1297 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CWF19L1	Q69YN2	538 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CYB5RL	Q6IPT4	315 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	B3GNT9	Q6UX72	402 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	FAM186B	Q8IYM0	893 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	IFNL2	Q8IZJ0	200 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	ZBTB34	Q8NCN2	500 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	NPLOC4	Q8TAT6	608 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	RUNDC1	Q96C34	613 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CHAMP1	Q96JM3	812 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	SMOC1	Q9H4F8	434 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	AS3MT	Q9HBK9	375 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CHST7	Q9NS84	486 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	CATSPERZ	Q9NTU4	200 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	KLHL11	Q9NVR0	708 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	GMPR2	Q9P2T1	348 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	TPX2	Q9ULW0	747 aa	Known RBP	4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	IPP	Q9Y573	584 aa		4.53	□□□□□ -1.68
SREK1-208	ENST00000520580	SHISA3	A0PJX4	238 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	SLC26A4	O43511	780 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	DGAT1	O75907	488 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	YBX3	P16989	372 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	HSPA6	P17066	643 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	RHCE	P18577	417 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	SEPHS1	P49903	392 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	ZNF280A	P59817	542 aa	Predicted RBP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	RHD	Q02161	417 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	FAP	Q12884	760 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	SLC4A8	Q2Y0W8	1093 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	FAM47C	Q5HY64	1035 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	CCDC149	Q6ZUS6	474 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	CHSY3	Q70JA7	882 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	GRAMD1C	Q8IYS0	662 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	FAM156A	Q8NDB6	213 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	RCBTB1	Q8NDN9	531 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	RNF141	Q8WVD5	230 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	POF1B	Q8WVV4	589 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	FBXL18	Q96ME1	805 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	FCRL3	Q96P31	734 aa	Predicted RBP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	ASPN	Q9BXN1	380 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	NSFL1C	Q9UNZ2	370 aa	Known RBP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	NOC2L	Q9Y3T9	749 aa	Known RBP	4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	PCDHA11	Q9Y5I1	949 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	NPFFR2	Q9Y5X5	522 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	SYNGAP1	Q96PV0	1343 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	CNTNAP4	Q9C0A0	1308 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	IGF1R	P08069	1367 aa		4.52	□□□□□ -1.69
SREK1-208	ENST00000520580	GFRA3	O60609	400 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	PDE6A	P16499	860 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	LTBR	P36941	435 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	FSTL4	Q6MZW2	842 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	GPAT2	Q6NUI2	795 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	TOGARAM2	Q6ZUX3	1019 aa		4.51	□□□□□ -1.69
SREK1-208	ENST00000520580	AGGF1	Q8N302	714 aa	eCLIP	4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms