RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FANCBQ8NB91 859 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC12Q8WUD4 166 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 DEFB118Q96PH6 123 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ARMT1Q9H993 441 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 FAM217BQ9NTX9 383 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 CWC15Q9P013 229 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ZSWIM5Q9P217 1185 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 LRP2BPQ9P2M1 347 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ZNF112Q9UJU3 913 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 DENND2AQ9ULE3 1009 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 MYH2Q9UKX2 1941 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 A0A0G2JLL6 359 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 DDTLA6NHG4 134 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 GSG1L2A8MUP6 293 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 PRPF3O43395 683 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 EVI5O60447 810 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 INHAP05111 366 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 BCRP11274 1271 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 BTDP43251 543 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 FASTKD5Q7L8L6 764 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 PRRT2Q7Z6L0 340 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 TMTC1Q8IUR5 882 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 FAM177A1Q8N128 213 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 MSL3Q8N5Y2 521 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 ANKRD13CQ8N6S4 541 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 IGSF22Q8N9C0 903 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 EHBP1Q8NDI1 1231 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 SPATA20Q8TB22 786 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 NUP133Q8WUM0 1156 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC47Q96A33 483 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 DDX4Q9NQI0 724 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 ZNF446Q9NWS9 450 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 NR2E3Q9Y5X4 410 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 FHOD1Q9Y613 1164 aa9.69□□□□□ -0.86
CTNNA1-223ENST00000520520 RANBP2P49792 3224 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 TNKSO95271 1327 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CTAGE9A4FU28 777 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CXCL11O14625 94 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 MFAP3LO75121 409 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 MYL1P05976 194 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CALML3P27482 149 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 KIF5BP33176 963 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 PPP1R2P41236 205 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CHMP4BP1P59074 171 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 STIM1Q13586 685 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 NR1I3Q14994 352 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 IFIT1BQ5T764 474 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CDKAL1Q5VV42 579 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 SRGAP1Q7Z6B7 1085 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 IQUBQ8NA54 791 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CTCFLQ8NI51 663 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 NOC3LQ8WTT2 800 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 DHX58Q96C10 678 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 MYL10Q9BUA6 226 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 CSRNP2Q9H175 543 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 INTS13Q9NVM9 706 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 DOCK1Q14185 1865 aa9.68□□□□□ -0.86
CTNNA1-223ENST00000520520 PDS5AQ29RF7 1337 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 SGPL1O95470 568 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CYP7A1P22680 504 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 FECHP22830 423 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CYP2C19P33261 490 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 TOB1P50616 345 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 PDE4BQ07343 736 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC178Q5BJE1 867 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 TTC38Q5R3I4 469 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 TREML2Q5T2D2 321 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CC2D1AQ6P1N0 951 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CYP26C1Q6V0L0 522 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 RSRC2Q7L4I2 434 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 LCORLQ8N3X6 602 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 KIFC2Q96AC6 838 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 IQCDQ96DY2 449 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 PHF20Q9BVI0 1012 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 MAGEF1Q9HAY2 307 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CABP5Q9NP86 173 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 RWDD2AQ9UIY3 292 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 CDC23Q9UJX2 597 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 AFG3L2Q9Y4W6 797 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 PCDHB6Q9Y5E3 794 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 TRIOBPQ9H2D6 2365 aa9.67□□□□□ -0.86
CTNNA1-223ENST00000520520 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 ENTPD3O75355 529 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 IPO7O95373 1038 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 ATP2C1P98194 919 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 MECOMQ03112 1051 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms