RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 RBM47A0AV96 593 aaKnown RBP16.3■□□□□ 0.2
VEGFA-221ENST00000520265 ARVCFO00192 962 aa16.3■□□□□ 0.2
VEGFA-221ENST00000520265 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
VEGFA-221ENST00000520265 RUFY3Q7L099 469 aa16.3■□□□□ 0.2
VEGFA-221ENST00000520265 RTEL1Q9NZ71 1219 aa16.3■□□□□ 0.2
VEGFA-221ENST00000520265 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-221ENST00000520265 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 CDC27P30260 824 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 ADD1P35611 737 aaKnown RBP16.29■□□□□ 0.2
VEGFA-221ENST00000520265 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
VEGFA-221ENST00000520265 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 C1orf53Q5VUE5 145 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
VEGFA-221ENST00000520265 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 AFG1LQ8WV93 481 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 BADQ92934 168 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 GDF15Q99988 308 aa16.29■□□□□ 0.2
VEGFA-221ENST00000520265 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
VEGFA-221ENST00000520265 MTG1Q9BT17 334 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-221ENST00000520265 KIAA1217Q5T5P2 1943 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
VEGFA-221ENST00000520265 ADCY7P51828 1080 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 GHRHRQ02643 423 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 STK3Q13188 491 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-221ENST00000520265 PPP1R12CQ9BZL4 782 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 EHMT1Q9H9B1 1298 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
VEGFA-221ENST00000520265 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
VEGFA-221ENST00000520265 GGPS1O95749 300 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 RCAN1P53805 252 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 NKX3-2P78367 333 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
VEGFA-221ENST00000520265 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 ANKRD33Q7Z3H0 272 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 VSIG10LQ86VR7 867 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 TDHQ8IZJ6 230 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.2
VEGFA-221ENST00000520265 ZSWIM6Q9HCJ5 1215 aa16.27■□□□□ 0.2
VEGFA-221ENST00000520265 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
VEGFA-221ENST00000520265 MEIS2O14770 477 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 CPLX1O14810 134 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 KPNA6O60684 536 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 MMP3P08254 477 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 SP4Q02446 784 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 PHKBQ93100 1093 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 TOX2Q96NM4 488 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
VEGFA-221ENST00000520265 NOD1Q9Y239 953 aa16.26■□□□□ 0.19
VEGFA-221ENST00000520265 TRIOBPQ9H2D6 2365 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 SMCO2A6NFE2 343 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 ZNF286BP0CG31 522 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
VEGFA-221ENST00000520265 BMP8BP34820 402 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 DGKDQ16760 1214 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 NLRX1Q86UT6 975 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 TRPV6Q9H1D0 765 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 FAM217BQ9NTX9 383 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PKD2L1Q9P0L9 805 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
VEGFA-221ENST00000520265 LTBP2Q14767 1821 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 A0A1W2PPC1 479 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 A6NJR5 290 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 STXBP3O00186 592 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 KIAA0355O15063 1070 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 FIBPO43427 364 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 B4GALT4O60513 344 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 STAM2O75886 525 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 SCG2P13521 617 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 PDIA3P30101 505 aaKnown RBP16.24■□□□□ 0.19
VEGFA-221ENST00000520265 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
VEGFA-221ENST00000520265 FPGSQ05932 587 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 FUT2Q10981 343 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-221ENST00000520265 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 PCNX4Q63HM2 1172 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
VEGFA-221ENST00000520265 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 PRO3102Q9H379 93 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
VEGFA-221ENST00000520265 TRMT13Q9NUP7 481 aaKnown RBP16.24■□□□□ 0.19
VEGFA-221ENST00000520265 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms