RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TRIM17Q9Y577 477 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 ATP6V1DQ9Y5K8 247 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 CEP350Q5VT06 3117 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 CYP3A7-CYP3A51PA0A087WV96 503 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 CCNT1O60563 726 aaKnown RBP20.24■□□□□ 0.83
SDC2-205ENST00000520233 EIF3JO75822 258 aaKnown RBP20.24■□□□□ 0.83
SDC2-205ENST00000520233 IGHA2P01877 340 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 GCFC2P16383 781 aaKnown RBP20.24■□□□□ 0.83
SDC2-205ENST00000520233 CYP3A7P24462 503 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 ZNF76P36508 570 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 LBX1P52954 281 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 CCL14Q16627 93 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 MXRA8Q9BRK3 442 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 FLRT1Q9NZU1 646 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 UBIAD1Q9Y5Z9 338 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 DOCK3Q8IZD9 2030 aa20.24■□□□□ 0.83
SDC2-205ENST00000520233 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
SDC2-205ENST00000520233 ORC2Q13416 577 aaPredicted RBP20.23■□□□□ 0.83
SDC2-205ENST00000520233 CEP55Q53EZ4 464 aa20.23■□□□□ 0.83
SDC2-205ENST00000520233 MBOAT7Q96N66 472 aa20.23■□□□□ 0.83
SDC2-205ENST00000520233 ZNF396Q96N95 335 aaPredicted RBP20.23■□□□□ 0.83
SDC2-205ENST00000520233 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.23■□□□□ 0.83
SDC2-205ENST00000520233 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
SDC2-205ENST00000520233 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
SDC2-205ENST00000520233 FAM86B1E9PN63 330 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 WNT7AO00755 349 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 TDP2O95551 362 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 SNAI1O95863 264 aaPredicted RBP20.22■□□□□ 0.83
SDC2-205ENST00000520233 FAM86B2P0C5J1 330 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 ITGB5P18084 799 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 Q4G0T1 1027 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 ATL3Q6DD88 541 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 RAET1EQ8TD07 263 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 PXYLP1Q8TE99 480 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 ZFP91Q96JP5 570 aaPredicted RBP20.22■□□□□ 0.83
SDC2-205ENST00000520233 INPP4AQ96PE3 977 aaPredicted RBP20.22■□□□□ 0.83
SDC2-205ENST00000520233 JADE2Q9NQC1 790 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.22■□□□□ 0.83
SDC2-205ENST00000520233 PCDHB6Q9Y5E3 794 aa20.22■□□□□ 0.83
SDC2-205ENST00000520233 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 IGLV3-22A0A075B6J6 115 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 MEIS1O00470 390 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 RGS20O76081 388 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 NBR1Q14596 966 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 ZNF174Q15697 407 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 MFSD14CQ5VZR4 134 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 TRIB2Q92519 343 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 GPRASP2Q96D09 838 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 VTA1Q9NP79 307 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 DDX25Q9UHL0 483 aaKnown RBP20.21■□□□□ 0.83
SDC2-205ENST00000520233 CASP8AP2Q9UKL3 1982 aa20.21■□□□□ 0.83
SDC2-205ENST00000520233 LRRC37A2A6NM11 1700 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 MAFGO15525 162 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 ADCY3O60266 1144 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 MCM7P33993 719 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 SETQ01105 290 aaPredicted RBP20.2■□□□□ 0.82
SDC2-205ENST00000520233 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
SDC2-205ENST00000520233 GNPTABQ3T906 1256 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 PRR16Q569H4 304 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
SDC2-205ENST00000520233 PLA2G4DQ86XP0 818 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 CYP2W1Q8TAV3 490 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 LENG9Q96B70 501 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 WDR11Q9BZH6 1224 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 KATNBL1Q9H079 304 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 ABHD16BQ9H3Z7 469 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 PTPN22Q9Y2R2 807 aa20.2■□□□□ 0.82
SDC2-205ENST00000520233 ICAM3P32942 547 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 CYP2C19P33261 490 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 DNM1Q05193 864 aaKnown RBP20.19■□□□□ 0.82
SDC2-205ENST00000520233 MTMR1Q13613 665 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 ANO1Q5XXA6 986 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 EEPD1Q7L9B9 569 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
SDC2-205ENST00000520233 FBXO16Q8IX29 292 aaPredicted RBP20.19■□□□□ 0.82
SDC2-205ENST00000520233 SLAIN1Q8ND83 568 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 NRBP1Q9UHY1 535 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 PTCH2Q9Y6C5 1203 aa20.19■□□□□ 0.82
SDC2-205ENST00000520233 SPATA31C2B4DYI2 1134 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 FIBPO43427 364 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 SLC37A4O43826 429 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 NEMFO60524 1076 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 BMP15O95972 392 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 ARP10275 920 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 SF3A1Q15459 793 aaKnown RBP20.18■□□□□ 0.82
SDC2-205ENST00000520233 SEPT14Q6ZU15 432 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
SDC2-205ENST00000520233 KCNH7Q9NS40 1196 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 TFIP11Q9UBB9 837 aaKnown RBP20.18■□□□□ 0.82
SDC2-205ENST00000520233 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 CEP131Q9UPN4 1083 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms