RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
R3HCC1-205ENST00000519952 EPHX3Q9H6B9 360 aa13.95□□□□□ -0.18
R3HCC1-205ENST00000519952 PRKAG2Q9UGJ0 569 aa13.95□□□□□ -0.18
R3HCC1-205ENST00000519952 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
R3HCC1-205ENST00000519952 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
R3HCC1-205ENST00000519952 M0R2N6 131 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 COL6A1P12109 1028 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 HMGCS2P54868 508 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 ZNF174Q15697 407 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 FSIP1Q8NA03 581 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 MRPS27Q92552 414 aaKnown RBP13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 PNMA2Q9UL42 364 aa13.94□□□□□ -0.18
R3HCC1-205ENST00000519952 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 FDX1P10109 184 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 CMA1P23946 247 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 HOXA7P31268 230 aaPredicted RBP13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 SNAP25P60880 206 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 MOGSQ13724 837 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 EARS2Q5JPH6 523 aaKnown RBP13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 RASGRP4Q8TDF6 673 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 TMEM63CQ9P1W3 806 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 REV3LO60673 3130 aa13.93□□□□□ -0.18
R3HCC1-205ENST00000519952 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 ZBED4O75132 1171 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 LIG1P18858 919 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 INF2Q27J81 1249 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 USH1GQ495M9 461 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 CCDC174Q6PII3 467 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 NAP1L4Q99733 375 aaKnown RBP13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 RANBP17Q9H2T7 1088 aaKnown RBP13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 FAM13BQ9NYF5 915 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 MRPL11Q9Y3B7 192 aaKnown RBP13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 PHIPQ8WWQ0 1821 aa13.92□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 CTAGE5O15320 804 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 FLOT1O75955 427 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 FOSP01100 380 aaPredicted RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 PTPREP23469 700 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 MCM7P33993 719 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 FAM160A1Q05DH4 1040 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 ORC2Q13416 577 aaPredicted RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 NEK8Q86SG6 692 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 RPAP3Q9H6T3 665 aaPredicted RBP13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
R3HCC1-205ENST00000519952 ABCB11O95342 1321 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 FAM86C2PA6NEL3 165 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 LAD1O00515 517 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 ADAMTS3O15072 1205 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 VCAM1P19320 739 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 ZNF445P59923 1031 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 PTGDRQ13258 359 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 TREML2Q5T2D2 321 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 TBCKQ8TEA7 893 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 TMEM260Q9NX78 707 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
R3HCC1-205ENST00000519952 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
R3HCC1-205ENST00000519952 SYCE3A1L190 88 aa13.89□□□□□ -0.19
R3HCC1-205ENST00000519952 GOLGA6L3A6NEY3 463 aa13.89□□□□□ -0.19
R3HCC1-205ENST00000519952 SPDYE3A6NKU9 549 aa13.89□□□□□ -0.19
R3HCC1-205ENST00000519952 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
R3HCC1-205ENST00000519952 NR1I2O75469 434 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms