RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 ASPRV1Q53RT3 343 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 DLK2Q6UY11 383 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 CATSPERGQ6ZRH7 1159 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 UBALD2Q8IYN6 164 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 CHST13Q8NET6 341 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 CCDC85AQ96PX6 553 aaPredicted RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 ESYT1Q9BSJ8 1104 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 MROH8Q9H579 483 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 VCPKMTQ9H867 229 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 TACC3Q9Y6A5 838 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 DDTLA6NHG4 134 aaPredicted RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 SLC15A5A6NIM6 579 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 USP17L10C9JJH3 530 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 STAM2O75886 525 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 MBD4O95243 580 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 TTLL1O95922 423 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 RASA1P20936 1047 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 CCNA1P78396 465 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 ORC2Q13416 577 aaPredicted RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 VGLL4Q14135 290 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 NECTIN1Q15223 517 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 IMMTQ16891 758 aaKnown RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 ABCB5Q2M3G0 1257 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 TUSC1Q2TAM9 212 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 CERKLQ49MI3 558 aaPredicted RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 NBPF12Q5TAG4 269 aaPredicted RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 ADGRA1Q86SQ6 560 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 LCORLQ8N3X6 602 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 BRI3BPQ8WY22 251 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 ESR2Q92731 530 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 RTP3Q9BQQ7 232 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 LSG1Q9H089 658 aaKnown RBP3.33□□□□□ -1.88
MCF2-208ENST00000519895 BOLA2Q9H3K6 86 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 DNAJC18Q9H819 358 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 SLC4A4Q9Y6R1 1079 aa3.33□□□□□ -1.88
MCF2-208ENST00000519895 DNM1LO00429 736 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MSCO60682 206 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 GSPT1P15170 499 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 PSMA5P28066 241 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 LAMA3Q16787 3333 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ZNF528Q3MIS6 628 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 PPP2R2DQ66LE6 453 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 CCDC129Q6ZRS4 1044 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 RIOX2Q8IUF8 465 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 REPS2Q8NFH8 660 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 CHURC1Q8WUH1 139 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 DNAJC2Q99543 621 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 PUS7LQ9H0K6 701 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 EPB41L4AQ9HCS5 686 aaPredicted RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 IL1RAPL2Q9NP60 686 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 DIAPH3Q9NSV4 1193 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 RBM28Q9NW13 759 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 SLC5A4Q9NY91 659 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MTMR4Q9NYA4 1195 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 TMOD4Q9NZQ9 345 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 BAZ2AQ9UIF9 1905 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 ESYT2A0FGR8 921 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 B4DLN1 442 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 M0R2C6 588 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 IDH1O75874 414 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 RPLP2P05387 115 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 ICAM3P32942 547 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 HSPA4P34932 840 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MRPL12P52815 198 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 DIXDC1Q155Q3 683 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 GALNT17Q6IS24 598 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MAMDC4Q6UXC1 1216 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MOB2Q70IA6 237 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 PROSER1Q86XN7 944 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ZNF710Q8N1W2 664 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 TMEM105Q8N8V8 129 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 OPTNQ96CV9 577 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 TRIM34Q9BYJ4 488 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 NAPBQ9H115 298 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ANTXR1Q9H6X2 564 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 GDPD2Q9HCC8 539 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 CWC22Q9HCG8 908 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 SH3GLB2Q9NR46 395 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ABCF2Q9UG63 623 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ANGEL1Q9UNK9 670 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 CACNA1HO95180 2353 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 BRCA2P51587 3418 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 STK36Q9NRP7 1315 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 LILRB3O75022 631 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 POLR3DP05423 398 aaPredicted RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 MCCP23508 829 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 GJA5P36382 358 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MCM2P49736 904 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 RBM5P52756 815 aaKnown RBP eCLIP3.32□□□□□ -1.88
MCF2-208ENST00000519895 EXOSC10Q01780 885 aaKnown RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 NFIAQ12857 509 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 NMIQ13287 307 aaPredicted RBP3.32□□□□□ -1.88
MCF2-208ENST00000519895 HIC1Q14526 733 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 ANKRD1Q15327 319 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 SEC23AQ15436 765 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 MORN1Q5T089 497 aa3.32□□□□□ -1.88
MCF2-208ENST00000519895 TGFBRAP1Q8WUH2 860 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms