RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 SRPRBQ9Y5M8 271 aaKnown RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 DOCK3Q8IZD9 2030 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 ZSWIM8A7E2V4 1837 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 GPR25O00155 361 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 PEX10O60683 326 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 FLOT1O75955 427 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 PFKFB1P16118 471 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 PRPHP41219 470 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 HERVK_113P62684 666 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 ATP2C1P98194 919 aaPredicted RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 CEBPZQ03701 1054 aaKnown RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 TYRO3Q06418 890 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 TRAF1Q13077 416 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 NR5A1Q13285 461 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 STX1AQ16623 288 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 SLC35G1Q2M3R5 365 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 TTC38Q5R3I4 469 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 SLFN13Q68D06 897 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 WWC2Q6AWC2 1192 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 C17orf99Q6UX52 265 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 PACS2Q86VP3 889 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 SMCR8Q8TEV9 937 aaPredicted RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 WNT2BQ93097 391 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 GOLPH3LQ9H4A5 285 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 C6orf50Q9HD87 102 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 FBXO28Q9NVF7 368 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
MRPS28-205ENST00000519386 HOOK1Q9UJC3 728 aaKnown RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 FBXO2Q9UK22 296 aaPredicted RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 COL11A1P12107 1806 aaPredicted RBP8.22□□□□□ -1.09
MRPS28-205ENST00000519386 PNMA6FA0A0J9YX94 578 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 CCDC194A0A1B0GVG4 234 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 C3orf80F5H4A9 247 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 FKTNO75072 461 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 BCRP11274 1271 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 SLC1A4P43007 532 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 SYKP43405 635 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 NDUFA8P51970 172 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 COG2Q14746 738 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 CCDC96Q2M329 555 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 HS1BP3Q53T59 392 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
MRPS28-205ENST00000519386 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 SHC4Q6S5L8 630 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 SASS6Q6UVJ0 657 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 BTNL9Q6UXG8 535 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 HEATR3Q7Z4Q2 680 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 ANKRD13CQ8N6S4 541 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
MRPS28-205ENST00000519386 ATG4CQ96DT6 458 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 ZFRQ96KR1 1074 aaKnown RBP8.21□□□□□ -1.1
MRPS28-205ENST00000519386 NAP1L4Q99733 375 aaKnown RBP8.21□□□□□ -1.1
MRPS28-205ENST00000519386 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 TXNRD2Q9NNW7 524 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 FAM13BQ9NYF5 915 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 PCDHB6Q9Y5E3 794 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
MRPS28-205ENST00000519386 MGAMO43451 1857 aa8.21□□□□□ -1.1
MRPS28-205ENST00000519386 A0A0G2JMZ2 1700 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 TMEM232C9JQI7 657 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 ZBTB5O15062 677 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 PLA2G6O60733 806 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 CNMDO75829 334 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 ZNF202O95125 648 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 BMP3P12645 472 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 GCLCP48506 637 aaPredicted RBP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 NAPAP54920 295 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 CAP1Q01518 475 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 SP3Q02447 781 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 PTGDRQ13258 359 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 NONOQ15233 471 aaKnown RBP eCLIP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 FAM110CQ1W6H9 321 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 LBX2Q6XYB7 198 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 KCTD1Q719H9 257 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 REXO1Q8N1G1 1221 aaKnown RBP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 CD99L2Q8TCZ2 262 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 GTF3C2Q8WUA4 911 aaPredicted RBP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 BPIFA3Q9BQP9 254 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 PANK2Q9BZ23 570 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 ARHGAP39Q9C0H5 1083 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 NAT10Q9H0A0 1025 aaKnown RBP8.2□□□□□ -1.1
MRPS28-205ENST00000519386 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 ANO10Q9NW15 660 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 RBPJLQ9UBG7 517 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 KCNH3Q9ULD8 1083 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 RABGAP1Q9Y3P9 1069 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 MRVI1Q9Y6F6 885 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 SMCHD1A6NHR9 2005 aa8.2□□□□□ -1.1
MRPS28-205ENST00000519386 A0A1B0GVL5 298 aa8.19□□□□□ -1.1
MRPS28-205ENST00000519386 VWA5AO00534 786 aa8.19□□□□□ -1.1
MRPS28-205ENST00000519386 GCFC2P16383 781 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms