RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 FOCADQ5VW36 1801 aa11.24□□□□□ -0.61
SH2D4A-204ENST00000519207 ANKRD31Q8N7Z5 1873 aa11.24□□□□□ -0.61
SH2D4A-204ENST00000519207 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
SH2D4A-204ENST00000519207 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 PP2D1A8MPX8 630 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 ANKRD65E5RJM6 399 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 COBLO75128 1261 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 GOLGA8HP0CJ92 632 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 KRT9P35527 623 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 ERVK-24P63145 666 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 COBLL1Q53SF7 1204 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 SOGA3Q5TF21 947 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 TTI2Q6NXR4 508 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 NEK8Q86SG6 692 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 CABP7Q86V35 215 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 ZNF507Q8TCN5 953 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 GPR101Q96P66 508 aaPredicted RBP11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 C7orf25Q9BPX7 421 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 BICDL2A1A5D9 508 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 CCNT1O60563 726 aaKnown RBP11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 SRGNP10124 158 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 PLCG1P19174 1290 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 AMPD3Q01432 767 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 FSTL1Q12841 308 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 MAP9Q49MG5 647 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 OR8K1Q8NGG5 319 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 MAPK8IP1Q9UQF2 711 aa11.23□□□□□ -0.61
SH2D4A-204ENST00000519207 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 LRRIQ3A6PVS8 624 aaPredicted RBP11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 HOXA7P31268 230 aaPredicted RBP11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 DNM2P50570 870 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 VSNL1P62760 191 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 LETM2Q2VYF4 491 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 ZNF569Q5MCW4 686 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 RETREG2Q8NC44 543 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 CRAMP1Q96RY5 1269 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 DNAJC7Q99615 494 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 TRIM9Q9C026 710 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 MCM8Q9UJA3 840 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
SH2D4A-204ENST00000519207 TRIM49BA6NDI0 452 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 RNF40O75150 1001 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 CCNE1P24864 410 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 PMS1P54277 932 aaKnown RBP11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 LRRC15Q8TF66 581 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 MIEF2Q96C03 454 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 NUP58Q9BVL2 599 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 ACBD3Q9H3P7 528 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 EXOC1Q9NV70 894 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 LUC7L2Q9Y383 392 aaKnown RBP11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 FAM169AQ9Y6X4 670 aa11.21□□□□□ -0.61
SH2D4A-204ENST00000519207 TTC26A0AVF1 554 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 POTECB2RU33 542 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 FSBPO95073 299 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 ARHGAP25P42331 645 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 MNAT1P51948 309 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 HSP90B2PQ58FF3 399 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 WLSQ5T9L3 541 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 STYK1Q6J9G0 422 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 ZNF662Q6ZS27 426 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 TBCKQ8TEA7 893 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 P2RX5Q93086 422 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 CNKSR1Q969H4 720 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 CALML4Q96GE6 196 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 MASTLQ96GX5 879 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 PIGSQ96S52 555 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 POLLQ9UGP5 575 aa11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.62
SH2D4A-204ENST00000519207 COL11A2P13942 1736 aaPredicted RBP11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 A0A0U1RQJ8 604 aa11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 NDUFA10O95299 355 aa11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 PDHBP11177 359 aa11.2□□□□□ -0.62
SH2D4A-204ENST00000519207 FXR2P51116 673 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms