RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 LZTS1Q9Y250 596 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 USP6P35125 1406 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 ANKRD34BA5PLL1 514 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.029e-6■■■■□ 24.8
CLK4-202ENST00000519132 CATIPQ7Z7H3 387 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 PAF1Q8N7H5 531 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 NUDT8Q8WV74 236 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 CLIP3Q96DZ5 547 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 WNK4Q96J92 1243 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 SLC12A7Q9Y666 1083 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 FRMPD2Q68DX3 1309 aaPredicted RBP8.68□□□□□ -1.02
CLK4-202ENST00000519132 BPIP17213 487 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 DGKGP49619 791 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 SUMO1P63165 101 aaKnown RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 PICALMQ13492 652 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 RAPGEF1Q13905 1077 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 PPP2R5DQ14738 602 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 ARMCX6Q7L4S7 300 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 TRIM46Q7Z4K8 759 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 EPN3Q9H201 632 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 NDFIP2Q9NV92 336 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 THG1LQ9NWX6 298 aaKnown RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 IPPQ9Y573 584 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 FAM163BP0C2L3 166 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 MST1RQ04912 1400 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 TRIM14Q14142 442 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 CLRN3Q8NCR9 226 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 EMC7Q9NPA0 242 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 C11orf16Q9NQ32 467 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 ZNF335Q9H4Z2 1342 aaPredicted RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 NTF4P34130 210 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 GTPBP3Q969Y2 492 aaKnown RBP8.67□□□□□ -1.02
CLK4-202ENST00000519132 SAMD15Q9P1V8 674 aa8.67□□□□□ -1.02
CLK4-202ENST00000519132 ACEP12821 1306 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 MSH6P52701 1360 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 TCEA3O75764 348 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 POU3F2P20265 443 aaPredicted RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 SNW1Q13573 536 aaKnown RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 CPA6Q8N4T0 437 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 NUCKS1Q9H1E3 243 aaKnown RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 NRBP1Q9UHY1 535 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 MARF1Q9Y4F3 1742 aaKnown RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 WDR64B1ANS9 1081 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 SLC26A4O43511 780 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 BRINP1O60477 761 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 RFPL1O75677 317 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 FKBP9O95302 570 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 FGFR1P11362 822 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 RXRBP28702 533 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 NLRP12P59046 1061 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 SMAP1Q8IYB5 467 aaPredicted RBP8.66□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGB6Q9Y5F9 930 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 PIK3C2AO00443 1686 aa8.66□□□□□ -1.02
CLK4-202ENST00000519132 DYTNA2CJ06 578 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 CPEP16870 476 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 IGFALSP35858 605 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 PMS1P54277 932 aaKnown RBP8.65□□□□□ -1.02
CLK4-202ENST00000519132 INAVAQ3KP66 663 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 PGM2L1Q6PCE3 622 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 NGEFQ8N5V2 710 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 DMTF1Q9Y222 760 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 FYB1O15117 783 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 HALP42357 657 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 USP14P54578 494 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 SCAND1P57086 179 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 STK3Q13188 491 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 HDXQ7Z353 690 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 TGFBRAP1Q8WUH2 860 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 PHTF1Q9UMS5 762 aa8.65□□□□□ -1.02
CLK4-202ENST00000519132 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.02
CLK4-202ENST00000519132 POLD1P28340 1107 aa8.65□□□□□ -1.03
CLK4-202ENST00000519132 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.03
CLK4-202ENST00000519132 ZCCHC8Q6NZY4 707 aaKnown RBP8.65□□□□□ -1.03
CLK4-202ENST00000519132 C1orf228Q6PIY5 440 aa8.65□□□□□ -1.03
CLK4-202ENST00000519132 SMC1BQ8NDV3 1235 aa8.65□□□□□ -1.03
CLK4-202ENST00000519132 EIF2AK1Q9BQI3 630 aaKnown RBP8.65□□□□□ -1.03
CLK4-202ENST00000519132 SAGE1Q9NXZ1 904 aa8.65□□□□□ -1.03
CLK4-202ENST00000519132 MAP2P11137 1827 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 CCDC163A0A0D9SF12 145 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 C2CD2LO14523 706 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 CCND1P24385 295 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 DSG1Q02413 1049 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 USP53Q70EK8 1073 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 SRLQ86TD4 932 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms