RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 PTK7Q13308 1070 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 IKBKEQ14164 716 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 TRIM71Q2Q1W2 868 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 VPS53Q5VIR6 699 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 TRAF7Q6Q0C0 670 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 GRXCR2A6NFK2 248 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 IL9P15248 144 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 DGKDQ16760 1214 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 LY6KQ17RY6 165 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 PTCRAQ6ISU1 281 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 C7orf31Q8N865 590 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 NEK9Q8TD19 979 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 EMID1Q96A84 441 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 MRPL38Q96DV4 380 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 TTC14Q96N46 770 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 KATNAL1Q9BW62 490 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 KCNH6Q9H252 994 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 HDAC6Q9UBN7 1215 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 CTNNA3Q9UI47 895 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 INSL6Q9Y581 213 aa14.5□□□□□ -0.09
TRAPPC9-204ENST00000518723 TRIP12Q14669 1992 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 F2P00734 622 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 SSTR3P32745 418 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 PSEN2P49810 448 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 HTRA4P83105 476 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 MBTPS1Q14703 1052 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 GPATCH4Q5T3I0 446 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 C20orf194Q5TEA3 1177 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 FBXO22Q8NEZ5 403 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 SP7Q8TDD2 431 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 NSUN6Q8TEA1 469 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 IWS1Q96ST2 819 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 C17orf80Q9BSJ5 609 aa14.49□□□□□ -0.09
TRAPPC9-204ENST00000518723 SIP14410 1827 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 EMSYQ7Z589 1322 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 POTEB3A0JP26 581 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 HAS3O00219 553 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 LGR5O75473 907 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 COL19A1Q14993 1142 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 STXBP2Q15833 593 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 PTPROQ16827 1216 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 TIGD5Q53EQ6 642 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 ZNF618Q5T7W0 954 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 POTEBQ6S5H4 581 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 SEPT14Q6ZU15 432 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 SYTL5Q8TDW5 730 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 OTUD7AQ8TE49 926 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 SAMD11Q96NU1 681 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 WDFY4Q6ZS81 3184 aa14.48□□□□□ -0.09
TRAPPC9-204ENST00000518723 ZMYM6O95789 1325 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 DCXO43602 365 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 HOXD8P13378 290 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 MRE11P49959 708 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 MFSD10Q14728 455 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 CSPP1Q1MSJ5 1256 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 KIAA0753Q2KHM9 967 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 USH1GQ495M9 461 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 RRP12Q5JTH9 1297 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 FAM117BQ6P1L5 589 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 CHST3Q7LGC8 479 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 WNT8BQ93098 351 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 TAAR1Q96RJ0 339 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 RMDN3Q96TC7 470 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 COL20A1Q9P218 1284 aa14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 DDX41Q9UJV9 622 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-204ENST00000518723 ABCB11O95342 1321 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 FGAP02671 866 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 AMHP03971 560 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 MX1P20591 662 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 NHLH1Q02575 133 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 LAMC2Q13753 1193 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 EPC2Q52LR7 807 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 MCF2L2Q86YR7 1114 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 TBC1D5Q92609 795 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 PABPC5Q96DU9 382 aaKnown RBP14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 UIMC1Q96RL1 719 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 HELLSQ9NRZ9 838 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 PRKAG3Q9UGI9 489 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 FAM50BQ9Y247 325 aa14.46□□□□□ -0.09
TRAPPC9-204ENST00000518723 COL4A6Q14031 1691 aa14.46□□□□□ -0.1
TRAPPC9-204ENST00000518723 SALL3Q9BXA9 1300 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 H3BNC9 293 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 H3BQ06 376 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 EIF3JO75822 258 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 ZNF286BP0CG31 522 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 ZP2Q05996 745 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 PLEKHG4Q58EX7 1191 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 SERINC5Q86VE9 423 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 MYOCDQ8IZQ8 938 aa14.45□□□□□ -0.1
TRAPPC9-204ENST00000518723 MIER1Q8N108 512 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms