RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CCDC148Q8NFR7 591 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 TSEN34Q9BSV6 310 aaKnown RBP25.23■■□□□ 1.63
VEGFA-217ENST00000518538 AP5M1Q9H0R1 490 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 SH3GLB2Q9NR46 395 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 LIMCH1Q9UPQ0 1083 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 PHF24Q9UPV7 400 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 STK36Q9NRP7 1315 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 MYADML2A6NDP7 307 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 STAM2O75886 525 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 TXNP10599 105 aaKnown RBP25.22■■□□□ 1.63
VEGFA-217ENST00000518538 PCNX4Q63HM2 1172 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 CCSAPQ6IQ19 270 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-217ENST00000518538 XRRA1Q6P2D8 792 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 CCDC62Q6P9F0 684 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 NECAB1Q8N987 351 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 IL27Q8NEV9 243 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 SENP6Q9GZR1 1112 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-217ENST00000518538 C6orf50Q9HD87 102 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 PCDHA6Q9UN73 950 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 PCDHA8Q9Y5H6 950 aa25.22■■□□□ 1.63
VEGFA-217ENST00000518538 MKI67P46013 3256 aaKnown RBP25.22■■□□□ 1.63
VEGFA-217ENST00000518538 CTAGE5O15320 804 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 DYNC1LI2O43237 492 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-217ENST00000518538 RGS20O76081 388 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 ARIH2O95376 493 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 PTGS1P23219 599 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 CLK2P49760 499 aaKnown RBP25.21■■□□□ 1.63
VEGFA-217ENST00000518538 MRPS9P82933 396 aaKnown RBP25.21■■□□□ 1.63
VEGFA-217ENST00000518538 PCSK9Q8NBP7 692 aaKnown RBP25.21■■□□□ 1.63
VEGFA-217ENST00000518538 EHMT1Q9H9B1 1298 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 VPS54Q9P1Q0 977 aa25.21■■□□□ 1.63
VEGFA-217ENST00000518538 MOXD2PA6NHM9 499 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 CTDNEP1O95476 244 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 FOSP01100 380 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-217ENST00000518538 GNA11P29992 359 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 IRX5P78411 483 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-217ENST00000518538 AP3B2Q13367 1082 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 KCNA10Q16322 511 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 GNASQ5JWF2 1037 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 KIAA1217Q5T5P2 1943 aa25.2■■□□□ 1.62
VEGFA-217ENST00000518538 FSCN1Q16658 493 aaKnown RBP25.19■■□□□ 1.62
VEGFA-217ENST00000518538 KCNV1Q6PIU1 500 aa25.19■■□□□ 1.62
VEGFA-217ENST00000518538 FAM177A1Q8N128 213 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-217ENST00000518538 OR6J1Q8NGC5 347 aa25.19■■□□□ 1.62
VEGFA-217ENST00000518538 ANO3Q9BYT9 981 aa25.19■■□□□ 1.62
VEGFA-217ENST00000518538 MRVI1Q9Y6F6 885 aa25.19■■□□□ 1.62
VEGFA-217ENST00000518538 ACLYP53396 1101 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 BEX3Q00994 111 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 LY6KQ17RY6 165 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 GNPTABQ3T906 1256 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 MCTP2Q6DN12 878 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 BICD2Q8TD16 824 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 COPS5Q92905 334 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 ZFP91Q96JP5 570 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-217ENST00000518538 ZSCAN31Q96LW9 406 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-217ENST00000518538 INPP4AQ96PE3 977 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-217ENST00000518538 TMEM260Q9NX78 707 aa25.18■■□□□ 1.62
VEGFA-217ENST00000518538 DDX41Q9UJV9 622 aaKnown RBP25.18■■□□□ 1.62
VEGFA-217ENST00000518538 A0A1W2PQ45 241 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-217ENST00000518538 A0A1W2PQY0 241 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 ST18O60284 1047 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 ZEB2O60315 1214 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 ASGR1P07306 291 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 ST3GAL1Q11201 340 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 REXO1Q8N1G1 1221 aaKnown RBP25.17■■□□□ 1.62
VEGFA-217ENST00000518538 DPF3Q92784 378 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 FERMT2Q96AC1 680 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 RTEL1Q9NZ71 1219 aa25.17■■□□□ 1.62
VEGFA-217ENST00000518538 GH1P01241 217 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 TGFB3P10600 412 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 CPT1AP50416 773 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 NLRP5P59047 1200 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 LRRC26Q2I0M4 334 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 JAKMIP3Q5VZ66 844 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 NSUN7Q8NE18 718 aaKnown RBP25.16■■□□□ 1.62
VEGFA-217ENST00000518538 PGBD1Q96JS3 809 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 AIFM3Q96NN9 605 aa25.16■■□□□ 1.62
VEGFA-217ENST00000518538 SH2B1Q9NRF2 756 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-217ENST00000518538 ORC3Q9UBD5 711 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-217ENST00000518538 ICAM3P32942 547 aa25.15■■□□□ 1.62
VEGFA-217ENST00000518538 SREBF1P36956 1147 aa25.15■■□□□ 1.62
VEGFA-217ENST00000518538 WASF1Q92558 559 aa25.15■■□□□ 1.62
VEGFA-217ENST00000518538 ADAMTS3O15072 1205 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 FIBPO43427 364 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 EVI5O60447 810 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 ATN1P54259 1190 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-217ENST00000518538 ARHGAP1Q07960 439 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 BRDTQ58F21 947 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-217ENST00000518538 SLC39A5Q6ZMH5 540 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 NLRX1Q86UT6 975 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 EMID1Q96A84 441 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-217ENST00000518538 GLT1D1Q96MS3 346 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 UBIAD1Q9Y5Z9 338 aa25.14■■□□□ 1.62
VEGFA-217ENST00000518538 TNRC18O15417 2968 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-217ENST00000518538 A6NJR5 290 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 SPATA31C2B4DYI2 1134 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 DTNBO60941 627 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 CABYRO75952 493 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 FDPSP14324 419 aaKnown RBP25.13■■□□□ 1.61
VEGFA-217ENST00000518538 XBP1P17861 261 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms