RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 FGD1P98174 961 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 CNTN2Q02246 1040 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 TNFAIP2Q03169 654 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 ITGA7Q13683 1181 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 KRT32Q14532 448 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 TTLL4Q14679 1199 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 TMEM63BQ5T3F8 832 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 CTR9Q6PD62 1173 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 BLOC1S2Q6QNY1 142 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 RPUSD2Q8IZ73 545 aaKnown RBP8.63□□□□□ -1.03
PVT1-206ENST00000517838 CPXCR1Q8N123 301 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 ANKRD35Q8N283 1001 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 KBTBD3Q8NAB2 608 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 SCLYQ96I15 445 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 SLC38A10Q9HBR0 1119 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 LIMCH1Q9UPQ0 1083 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 SMC3Q9UQE7 1217 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
PVT1-206ENST00000517838 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.63□□□□□ -1.03
PVT1-206ENST00000517838 CDK5RAP2Q96SN8 1893 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 FAM86C2PA6NEL3 165 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 ZBBXA8MT70 800 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 ZBED4O75132 1171 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 CABYRO75952 493 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 ARHGEF15O94989 841 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 CA3P07451 260 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 CPA1P15085 419 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 ADD2P35612 726 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 PSMC6P62333 389 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 CUL4AQ13619 759 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 FSCN1Q16658 493 aaKnown RBP8.62□□□□□ -1.03
PVT1-206ENST00000517838 MCMDC2Q4G0Z9 681 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 TMEM67Q5HYA8 995 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 FAM133AQ8N9E0 248 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 CHST13Q8NET6 341 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 NLRP7Q8WX94 980 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 INTS4Q96HW7 963 aaKnown RBP8.62□□□□□ -1.03
PVT1-206ENST00000517838 ZSCAN31Q96LW9 406 aaPredicted RBP8.62□□□□□ -1.03
PVT1-206ENST00000517838 CD320Q9NPF0 282 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 COG5Q9UP83 839 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 SMCHD1A6NHR9 2005 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 PIEZO1Q92508 2521 aa8.62□□□□□ -1.03
PVT1-206ENST00000517838 TRANK1O15050 2925 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 PI4K2BG5E9Z4 385 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 DYNC1LI2O43237 492 aaPredicted RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 SMPD1P17405 629 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 TAP1Q03518 808 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 TLK2Q86UE8 772 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 ZNF589Q86UQ0 364 aaPredicted RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 ALYREFQ86V81 257 aaKnown RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 CCDC83Q8IWF9 413 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.61□□□□□ -1.03
PVT1-206ENST00000517838 ARNTL2Q8WYA1 636 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 HLA-CQ95604 372 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 IL17RAQ96F46 866 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 TM6SF1Q9BZW5 370 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.61□□□□□ -1.03
PVT1-206ENST00000517838 ALDH8A1Q9H2A2 487 aaPredicted RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 SH2B1Q9NRF2 756 aaPredicted RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 HELLSQ9NRZ9 838 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 NYAP2Q9P242 653 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 FBXO40Q9UH90 709 aa8.61□□□□□ -1.03
PVT1-206ENST00000517838 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
PVT1-206ENST00000517838 MYH1P12882 1939 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 RNF113AO15541 343 aaKnown RBP8.6□□□□□ -1.03
PVT1-206ENST00000517838 LPXNO60711 386 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 CYP2C9P11712 490 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 RASA1P20936 1047 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 GRB10Q13322 594 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 TAPT1Q6NXT6 567 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 RUFY3Q7L099 469 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 SPRED2Q7Z698 418 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 DEFB128Q7Z7B8 93 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 MAP4K1Q92918 833 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 MKL1Q969V6 931 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 SEZ6LQ9BYH1 1024 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 AP5M1Q9H0R1 490 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 HOMER2Q9NSB8 354 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
PVT1-206ENST00000517838 CLIP2Q9UDT6 1046 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 FEM1BQ9UK73 627 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 NAP1L2Q9ULW6 460 aaPredicted RBP8.6□□□□□ -1.03
PVT1-206ENST00000517838 SLC4A4Q9Y6R1 1079 aa8.6□□□□□ -1.03
PVT1-206ENST00000517838 ZNF536O15090 1300 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 IGKV6D-41A0A0C4DH26 115 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 ASB14A6NK59 587 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 ZEB2O60315 1214 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 ZFYP08048 801 aaPredicted RBP8.59□□□□□ -1.03
PVT1-206ENST00000517838 PFKMP08237 780 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 OAZ1P54368 228 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 PKP1Q13835 747 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms