RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 CENPBP07199 599 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 TRAF1Q13077 416 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 GRM4Q14833 912 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 TMEM63BQ5T3F8 832 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 STOX1Q6ZVD7 989 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 OTOP2Q7RTS6 562 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 SPRED2Q7Z698 418 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 FAM126BQ8IXS8 530 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 SYTL5Q8TDW5 730 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 MTMR8Q96EF0 704 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
PDGFRB-203ENST00000517660 ZBTB5O15062 677 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 LPXNO60711 386 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 CD4P01730 458 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 FGBP02675 491 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 PTGS1P23219 599 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 TROAPQ12815 778 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 CHST3Q7LGC8 479 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 FAM178BQ8IXR5 827 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 SCFD2Q8WU76 684 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 TAAR1Q96RJ0 339 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 IWS1Q96ST2 819 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 POLR3EQ9NVU0 708 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 TRIOO75962 3097 aa12.28□□□□□ -0.44
PDGFRB-203ENST00000517660 DCHS1Q96JQ0 3298 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 CA3P07451 260 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 TXNP10599 105 aaKnown RBP12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 CPT1AP50416 773 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 ANTXR2P58335 489 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 TMTC2Q8N394 836 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 SAMD3Q8N6K7 520 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 OR6J1Q8NGC5 347 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 RMDN3Q96TC7 470 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 KCNH6Q9H252 994 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 MAP3K20Q9NYL2 800 aaKnown RBP12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
PDGFRB-203ENST00000517660 MYO15AQ9UKN7 3530 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 SLC27A2O14975 620 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 KPNA6O60684 536 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 CFBP00751 764 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 MCM5P33992 734 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 HSD17B4P51659 736 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 GHRHRQ02643 423 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 STXBP2Q15833 593 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 SLC35G1Q2M3R5 365 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 ARHGEF16Q5VV41 709 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 CASC1Q6TDU7 716 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 GJD3Q8N144 294 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 PIGSQ96S52 555 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 MAP3K14Q99558 947 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 COL20A1Q9P218 1284 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-203ENST00000517660 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 A6NJR5 290 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 OPLAHO14841 1288 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 PRC1O43663 620 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 NR3C2P08235 984 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 MYL3P08590 195 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 PSMC6P62333 389 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 GRB10Q13322 594 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 CREB3L3Q68CJ9 461 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 HOMER1Q86YM7 354 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 COPS5Q92905 334 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 TMEM87BQ96K49 555 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 MTG1Q9BT17 334 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
PDGFRB-203ENST00000517660 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms