RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ALX1Q15699 326 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 GBP6Q6ZN66 633 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZNF18P17022 549 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 ABCB4P21439 1286 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 CASP7P55210 303 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 ANKZF1Q9H8Y5 726 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZNF142P52746 1687 aaPredicted RBP11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 FLOT1O75955 427 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 CXCR5P32302 372 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 PRCPP42785 496 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 TRAPPC10P48553 1259 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 USP17L2Q6R6M4 530 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 KCTD1Q719H9 257 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 NLRX1Q86UT6 975 aa11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 ELOA2Q8IYF1 753 aaPredicted RBP11.9□□□□□ -0.51
PCDHGA1-202ENST00000517417 CD19P15391 556 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 UBXN2AP68543 259 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 ICE2Q659A1 982 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 DAAM2Q86T65 1068 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC63Q8NA47 563 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 LEMD3Q9Y2U8 911 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 LGALS16A8MUM7 142 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 TOB1P50616 345 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 ZBTB16Q05516 673 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 DPYDQ12882 1025 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 CEP57Q86XR8 500 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 FMNL3Q8IVF7 1028 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 DDX12PQ92771 950 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 EXOC7Q9UPT5 735 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 IVNS1ABPQ9Y6Y0 642 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 MOCS3O95396 460 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 GJA10Q969M2 543 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 RIPOR2Q9Y4F9 1068 aa11.89□□□□□ -0.51
PCDHGA1-202ENST00000517417 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 TNNI1P19237 187 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 ZBED6P86452 979 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 MIER3Q7Z3K6 550 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 PEX26Q7Z412 305 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 GLG1Q92896 1179 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 LSM14BQ9BX40 385 aaKnown RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 THAP9Q9H5L6 903 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 RPS6KA1Q15418 735 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 VPS72Q15906 364 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 TADA2BQ86TJ2 420 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 RIN2Q8WYP3 895 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 P2RX5Q93086 422 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 COA7Q96BR5 231 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 TSNARE1Q96NA8 513 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 EPB41L4AQ9HCS5 686 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 L1RE1Q9UN81 338 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 LTN1O94822 1766 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 NFAT5O94916 1531 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 KRT19P08727 400 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 EPHB4P54760 987 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC170Q8IYT3 715 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 COG1Q8WTW3 980 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 PANK4Q9NVE7 773 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 MARF1Q9Y4F3 1742 aaKnown RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 E7EVH7 732 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 BMP6P22004 513 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 MECOMQ03112 1051 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 E2F4Q16254 413 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 CSRNP1Q96S65 589 aa11.88□□□□□ -0.51
PCDHGA1-202ENST00000517417 GDF11O95390 407 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 TFRCP02786 760 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 ERVK-24P63145 666 aa11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA1-202ENST00000517417 UAP1Q16222 522 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms