RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PMEPA1Q969W9 287 aa0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 HMCESQ96FZ2 354 aa0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 ACSBG1Q96GR2 724 aa0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 GPBP1L1Q9HC44 474 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 KIAA1586Q9HCI6 787 aa0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 KIAA1024Q9UPX6 916 aa0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 DIS3Q9Y2L1 958 aaKnown RBP0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 PRRC2AP48634 2157 aaKnown RBP0.03□□□□□ -2.4
SNORA40.16-201ENST00000517238 DRGXA6NNA5 263 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 DCDC2CA8MYV0 355 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 TRAF5O00463 557 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FUCA1P04066 466 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 RHCEP18577 417 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 PLA2G5P39877 138 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 AVPR1BP47901 424 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 NANOS2P60321 138 aaKnown RBP0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FOXL1Q12952 345 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF662Q6ZS27 426 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LRRC55Q6ZSA7 311 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CXorf67Q86X51 503 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ETFBKMTQ8IXQ9 262 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CAGE1Q8TC20 777 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FBXO41Q8TF61 875 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 NSMCE1Q8WV22 266 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 VTI1AQ96AJ9 217 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ANKRD9Q96BM1 317 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 TSPAN17Q96FV3 270 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LMLNQ96KR4 655 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LYZL4Q96KX0 146 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 DUSP26Q9BV47 211 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 PLA2G12BQ9BX93 195 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 HIPK2Q9H2X6 1198 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FBRSQ9HAH7 460 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 RXFP1Q9HBX9 757 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LATS2Q9NRM7 1088 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 GJB4Q9NTQ9 266 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 TCFL5Q9UL49 500 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 OAZ3Q9UMX2 235 aa0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 SHISA3A0PJX4 238 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PPFIA4O75335 1185 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 GRIA4P48058 902 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PTTG1IPP53801 180 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PCBP3P57721 371 aaKnown RBP0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 LAMB3Q13751 1172 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 NCOA4Q13772 614 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CNGB1Q14028 1251 aaPredicted RBP0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 TOB2Q14106 344 aaPredicted RBP0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 NKG7Q16617 165 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PRAMEF13Q5VWM6 474 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 SUSD1Q6UWL2 747 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CD300LDQ6UXZ3 194 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF788Q6ZQV5 615 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 GPR155Q7Z3F1 870 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 MYPOPQ86VE0 399 aaPredicted RBP0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ADHFE1Q8IWW8 467 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 USHBP1Q8N6Y0 703 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 KREMEN2Q8NCW0 462 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 GPR152Q8TDT2 470 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 DENND1AQ8TEH3 1009 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CAVIN3Q969G5 261 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 C16orf92Q96LL3 132 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 DPYSL5Q9BPU6 564 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ELOVL5Q9NYP7 299 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 FZD1Q9UP38 647 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 RBM19Q9Y4C8 960 aaKnown RBP0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 TENM1Q9UKZ4 2725 aa0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 IGKV6D-21A0A0A0MT36 114 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 RBM47A0AV96 593 aaKnown RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 PYCARD-AS1I3L0S3 204 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 PPEF2O14830 753 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 CLASP2O75122 1294 aaKnown RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 ALPLP05186 524 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 TACR1P25103 407 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 RPS19P39019 145 aaKnown RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 ATP1A2P50993 1020 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 PLCD1P51178 756 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF157P51786 506 aaPredicted RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 SLC9A5Q14940 896 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 CHRNA2Q15822 529 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 MAP1SQ66K74 1059 aaPredicted RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 TRIM50Q86XT4 487 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 LCORLQ8N3X6 602 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 VGLL2Q8N8G2 317 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 GPBAR1Q8TDU6 330 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 IGFBPL1Q8WX77 278 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 THOC3Q96J01 351 aaKnown RBP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZSWIM3Q96MP5 696 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 JMJD8Q96S16 334 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 GNL3Q9BVP2 549 aaKnown RBP eCLIP0□□□□□ -2.41
SNORA40.16-201ENST00000517238 EGLN1Q9GZT9 426 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 BHMT2Q9H2M3 363 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 SEMA4GQ9NTN9 838 aa0□□□□□ -2.41
SNORA40.16-201ENST00000517238 PRAMEF27A3QJZ7 478 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 EREGO14944 169 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 LZTS3O60299 673 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CYP7B1O75881 506 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 C1QL1O75973 258 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PRR35P0CG20 571 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 SCP2P22307 547 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 IGFBP4P22692 258 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms