RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ESYT2A0FGR8 921 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 DYNC1LI2O43237 492 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FIBPO43427 364 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TIMP1P01033 207 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ICAM3P32942 547 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RFC2P35250 354 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MDM2Q00987 491 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EXOSC10Q01780 885 aaKnown RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RBL2Q08999 1139 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 LAMC2Q13753 1193 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 DGKDQ16760 1214 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RTN1Q16799 776 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SLC35G1Q2M3R5 365 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PCNX4Q63HM2 1172 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FAM109BQ6ICB4 259 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MFSD5Q6N075 450 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 BLOC1S2Q6QNY1 142 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CXCL17Q6UXB2 119 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CHST3Q7LGC8 479 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 VSIG10LQ86VR7 867 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TMEM199Q8N511 208 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FANCBQ8NB91 859 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GIMAP8Q8ND71 665 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SMARCC2Q8TAQ2 1214 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CAGE1Q8TC20 777 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCDC12Q8WUD4 166 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SENP7Q9BQF6 1050 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ALDH8A1Q9H2A2 487 aaPredicted RBP6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PDGFCQ9NRA1 345 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TMEM39AQ9NV64 488 aa6.91□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TRIM43BA6NCK2 446 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SPDYE3A6NKU9 549 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GOLGA8BA8MQT2 603 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MEIS2O14770 477 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MAFGO15525 162 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ARIH2O95376 493 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PLEKHA8P1O95397 391 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FOSP01100 380 aaPredicted RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CASTP20810 708 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 UBA1P22314 1058 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 METAP2P50579 478 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EVCP57679 992 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ANAPC15P60006 121 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FGD1P98174 961 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 BEX3Q00994 111 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ARHGAP1Q07960 439 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NEDD9Q14511 834 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ADCK5Q3MIX3 580 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 METTL7BQ6UX53 244 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SRBD1Q8N5C6 995 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCDC148Q8NFR7 591 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 BADQ92934 168 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 VTI1AQ96AJ9 217 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TRIM43Q96BQ3 446 aaPredicted RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GPRASP2Q96D09 838 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PURBQ96QR8 312 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TAAR1Q96RJ0 339 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MYL10Q9BUA6 226 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RNF26Q9BY78 433 aaPredicted RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 HIPK3Q9H422 1215 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SENP2Q9HC62 589 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
SCARNA18.1-201ENST00000516330 COL4A6Q14031 1691 aa6.9□□□□□ -1.31
SCARNA18.1-201ENST00000516330 KLF18A0A0U1RQI7 1052 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 B4GALT4O60513 344 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CAND2O75155 1236 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RGS20O76081 388 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BFSP2Q13515 415 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SEPT14Q6ZU15 432 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SH3RF1Q7Z6J0 888 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NLRX1Q86UT6 975 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DHX37Q8IY37 1157 aaKnown RBP6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RASEFQ8IZ41 740 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PSTPIP2Q9H939 334 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BARHL2Q9NY43 387 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SNX14Q9Y5W7 946 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SZT2Q5T011 3432 aa6.89□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GRIN2DO15399 1336 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HAS3O00219 553 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NOP56O00567 594 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PPFIA4O75335 1185 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BAIAP3O94812 1187 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GGPS1O95749 300 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MYL3P08590 195 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SCG2P13521 617 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RXRAP19793 462 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GNA11P29992 359 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms